Edwardsiella piscicida C07-087: ETAC_00480
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Entry
ETAC_00480 CDS
T02509
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
etc
Edwardsiella piscicida C07-087
Pathway
etc03420
Nucleotide excision repair
etc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
etc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ETAC_00480
03430 Mismatch repair
ETAC_00480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
etc03400
]
ETAC_00480
Enzymes [BR:
etc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ETAC_00480
DNA repair and recombination proteins [BR:
etc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ETAC_00480
MMR (mismatch excision repair)
Other MMR factors
ETAC_00480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AGH72229
LinkDB
All DBs
Position
104473..106632
Genome browser
AA seq
719 aa
AA seq
DB search
MDVSDLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLLAVENCSPFSIMAV
TFTNKAAAEMRHRIEALIGTSQGGMWIGTFHGLAHRLLRAHHLDAGLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPARQGMWYINGKKDDGLRPQHIESYGNPVEQTWLRIYQAYQEA
CDRAGLVDFAELLLRAHELWLHKPQILEHYRARFNNILVDEFQDTNRIQYAWIRMLAGDS
GRVMIVGDDDQSIYGWRGAQVENIQKFLDDFPGAQTIRLEQNYRSSGNILRAANALIENN
DGRLGKKLWTEDGEGEPISLYCAFNELDEARFVVNRIKAWQDNGGALKECAILYRSNAQS
RVLEEALLQAATPYRIYGGMRFFERQEIKDALAYLRLLSNRNDDAAFERVVNTPVRGIGD
RTLDVVRQTARDRQLTLWQATRALLQEQVFPGRAANALRRFLELIEALAQDSDDLPLHVQ
TDRVIRDSGLRQMYEQEKGEKGQTRIENLEELVTATRQFSYEDDDDLSPLQAFLSHAALE
SGEGQADAYQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYV
GVTRAMRKLTLTYAESRRLYGKEVYHRPSRFVGELPETCVEEVRLRASVTRPVSHARMGT
PLSQSDSGYRLGQRVAHAKFGEGTIINLEGSGEHTRLQIAFKGEGIKWLVAAYARLEVL
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggacgtatctgacctgcttgacagcctgaacgataaacagcgcgaggcggtagccgcg
ccgcgcagcaacctgctggtgctggccggcgcaggcagcggtaagacccgcgttctggtg
caccgtatcgcctggctattggcggtagaaaactgttcgccgttctccatcatggcggtc
acctttaccaataaggcggcggcggaaatgcggcaccgtattgaggcgctgatcggcacc
agccagggggggatgtggatcggcaccttccacggcctagcgcaccgcctgctgcgcgcc
caccatttggacgccggtctgccgcaggactttcaaatcctcgatagcgaagatcagctg
cgtttgctgaagcgcctgatcaaggccatgaatctggatgagaaacagtggcctgcgcgt
cagggcatgtggtacatcaacggcaagaaagatgatgggctgcgtccgcagcacattgaa
agctatggtaacccggtggagcaaacctggctgcgtatctatcaggcctatcaggaagcc
tgcgatcgcgcggggctggtagactttgccgagctgctgctgcgcgcgcacgagctgtgg
ctgcacaagccccagatcctggagcactaccgcgcccgctttaacaatatcctggtggat
gagttccaggataccaaccgtattcagtatgcctggatccgcatgctggccggtgacagc
ggcagggtgatgatcgtcggcgatgacgatcagtcgatctatggctggcgcggtgcccag
gtagagaacattcagaaattcctcgatgatttccccggcgcgcagacgatccgcctggag
cagaactatcgctccagcggcaatatcctgcgcgcggccaacgcgctgatcgaaaacaac
gatggtcgcctgggtaaaaagctgtggacggaggacggtgaaggggagccgatctccctg
tattgcgcgttcaacgagctggatgaggcgcgcttcgtggttaaccgaatcaaggcctgg
caggataacggcggtgccttgaaagagtgtgccatcctgtaccgcagtaacgcccagtcc
cgcgtgctggaggaggcgctgctgcaggcggcgacgccctatcggatttacgggggaatg
cgtttcttcgagcgccaggagatcaaggatgcgctggcctatctgcgcctgctgtccaac
cgtaacgatgacgccgcctttgagcgggtggtgaatacgccggtgcgcggtatcggcgat
cggacgctggacgtggtgcgtcagacggcccgcgatcgccagcttaccctgtggcaggcg
acccgcgcactgctgcaggagcaggtgtttccggggcgcgccgccaacgcgctgcgccgc
tttctggagctgattgaggcgctggcgcaagacagcgacgatctcccgctgcacgtgcag
accgatcgggtgatccgtgactccgggctgcgtcagatgtatgagcaggagaaaggcgag
aaagggcagacgcgcatcgaaaacctggaggagctggtgacggcgacgcgccagttcagc
tatgaggacgacgatgatctgtcgccgctgcaggcgtttctgtctcatgccgccttggag
tccggcgaggggcaggccgacgcctatcaggatgcggtacagctgatgaccctgcactct
gccaagggactggagtttccccaagttttcatcgttgggatggaggaggggatgttcccc
agccagatgtcgctggatgaaggcgggcgactggaagaggagcggcgtctggcctacgtc
ggcgtgacccgggcgatgcgtaagctgaccctgacctatgcggaaagccggcgcctgtac
ggcaaagaggtgtatcaccgtccgtcgcgctttgtcggcgaactgccggagacgtgcgta
gaagaggtgcgcctgcgcgccagcgtgacgcgccccgttagccatgcgcgtatggggacg
ccgttaagccagagtgacagcggctatcgcctggggcagcgcgtcgcccatgccaaattc
ggcgaggggacgattatcaacctggagggcagcggggagcatacccgcttacagatcgcc
tttaagggcgaggggattaagtggctggtcgccgcatatgcccgccttgaggtgctgtag
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