Edwardsiella piscicida C07-087: ETAC_01355
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Entry
ETAC_01355 CDS
T02509
Name
(GenBank) Heat shock protein 60 family chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
etc
Edwardsiella piscicida C07-087
Pathway
etc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
etc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ETAC_01355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etc03019
]
ETAC_01355
03110 Chaperones and folding catalysts [BR:
etc03110
]
ETAC_01355
03029 Mitochondrial biogenesis [BR:
etc03029
]
ETAC_01355
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
etc04147
]
ETAC_01355
Enzymes [BR:
etc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
ETAC_01355
Messenger RNA biogenesis [BR:
etc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ETAC_01355
Chaperones and folding catalysts [BR:
etc03110
]
Heat shock proteins
HSP60 / Chaperonin
ETAC_01355
Mitochondrial biogenesis [BR:
etc03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
ETAC_01355
Exosome [BR:
etc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ETAC_01355
Exosomal proteins of other body fluids (saliva and urine)
ETAC_01355
Exosomal proteins of breast cancer cells
ETAC_01355
Exosomal proteins of colorectal cancer cells
ETAC_01355
Exosomal proteins of bladder cancer cells
ETAC_01355
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AGH72404
LinkDB
All DBs
Position
321483..323126
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGSPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI
DKAVTAAVEELKALSVPCSDSKAIAQVGTISANADDTVGQLIAEAMEKVGKEGVITVEEG
TGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAV
AKAGKPLLIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIATLTAGTV
ISEEIGMELEKATLEDLGQAKRVVINKDTTIIIDGVGEESAIQGRVTQIRQQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALV
RVAAKLVDLKGINEEQNVGIKVALRAMEAPLRQIVANAGEEPSVVTNNVKAGEGNYGYNA
ATEEYGDMIDMGILDPTKVTRSALQYASSVAGLMITTECMVTDLPKEEKADLGAAGMGGM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaatttggtaatgacgcccgcgtaaaaatgctgcgcggcgtg
aacgttctggcagacgcagtgaaagtgaccctgggtccgaaaggccgtaacgtggtcctg
gataaatccttcgggtctccgaccatcaccaaagacggcgtgtccgttgcgcgtgaaatc
gaactggaagacaagttcgagaacatgggcgcgcagatggtgaaagaagtcgcctccaag
gcgaatgacgccgccggtgacggcaccaccaccgcaaccgtactggcacaggctatcgtt
aacgaaggtctgaaagccgtggctgcgggtatgaacccgatggatctgaagcgcggcatc
gacaaagccgtgaccgccgccgttgaagagctgaaggcgctgtctgtaccgtgctctgac
tctaaagccattgcgcaggtagggaccatctccgccaacgccgacgacaccgtgggccag
ctgatcgctgaagccatggaaaaagtgggtaaagaaggcgttatcaccgttgaagaaggc
accggtctgcaggacgagctggacgtggttgaaggtatgcagttcgatcgcggctacctg
tctccgtacttcatcaacaagccggaaaccggcgccgttgagctggaaagcccgttcatt
ctgctggctgacaagaagatctccaacatccgcgaaatgctgccggtgctggaagccgtt
gctaaagccggtaagccgctgctgatcatcgccgaagacgttgaaggtgaagcgctggcg
accctggtggtcaacaacatgcgcggtatcgtgaaagtggctgcggtgaaagcgccgggc
ttcggcgatcgtcgtaaggcgatgctgcaggatatcgctaccctgaccgccggtaccgtt
atctctgaagagatcggtatggagttggaaaaagcgacgctggaagatctgggccaggct
aaacgcgtggtcatcaacaaagacaccaccattatcatcgatggcgtgggcgaagagtct
gccattcagggtcgtgttactcagatccgtcagcagattgaagaagcgacctctgactac
gatcgtgaaaaactgcaggagcgcgtggctaaactggcgggcggcgtagccgttatcaag
gttggcgcggcaactgaagttgaaatgaaagagaagaaagcacgcgtagaagacgccctg
cacgcaacccgtgctgcggtggaagaaggcgtggtggccggcggcggcgtggcgctggtt
cgcgtagcggccaagctggttgatctgaaaggcatcaacgaagagcagaacgtcggtatc
aaggttgcgctgcgcgcgatggaagcgccgctgcgtcagatcgtggccaacgccggtgaa
gagccgtcagtggtcaccaacaacgtgaaggctggcgaaggtaactacggctataacgcg
gcgaccgaagagtacggcgacatgatcgatatgggtatcctggatccgaccaaggtaacc
cgctctgcgctgcagtacgcttcctctgttgccggtctgatgatcaccaccgagtgcatg
gtgaccgatctgccgaaggaagagaaagctgacctgggtgctgccggtatgggtggcatg
ggcggcatgggcggcatgatgtaa
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