Edwardsiella piscicida C07-087: ETAC_03350
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Entry
ETAC_03350 CDS
T02509
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
etc
Edwardsiella piscicida C07-087
Brite
KEGG Orthology (KO) [BR:
etc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
etc03016
]
ETAC_03350
Enzymes [BR:
etc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
ETAC_03350
Transfer RNA biogenesis [BR:
etc03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
ETAC_03350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AGH72801
LinkDB
All DBs
Position
complement(772856..773386)
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AA seq
176 aa
AA seq
DB search
MQQRLFFAIPLPPPLQQTLIQWRAEHFSSQAGRPIAAANLHLTLAFLGDVGSAQQQRLQT
LAGRIRQAPFSLTLDDAGQWPRPGVVWLGMRRAPRGLIQLAELLRSQAARSGCYQSPLPF
HPHITLLRHAYQAVAIPAATFRWSFDVTHFSLFSSQQSQGRTRNQPLASWPLRRDD
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaacgccttttttttgccattccgctaccgccgccgctgcagcaaacgctgatc
cagtggcgagccgagcacttttcttcccaggcaggacgaccgatcgccgccgccaacctg
catctgacgctggcttttcttggcgacgtcggcagcgcacagcagcagcgtctgcagacg
ctggccgggcgtatccgtcaggcgccctttagcctgacgctggatgacgccggtcagtgg
ccgcgccccggcgtggtctggctgggtatgcgccgggcgccgcgcggactgatccagctg
gcggagctgctccgctcgcaggcggcgcgcagcggctgctaccagagcccgctccccttt
catccgcatatcacgctgctgcgtcacgcctatcaggcggtcgcgatccccgcggcgacc
tttcgctggtcgtttgacgtaacgcacttttccctgttcagctcgcagcagtcccaggga
cgcacccgcaatcaaccgctggccagctggcccctgcggcgcgatgactaa
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