Edwardsiella piscicida C07-087: ETAC_03435
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Entry
ETAC_03435 CDS
T02509
Symbol
recD
Name
(GenBank) exonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
etc
Edwardsiella piscicida C07-087
Pathway
etc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
etc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ETAC_03435 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
etc03400
]
ETAC_03435 (recD)
Enzymes [BR:
etc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ETAC_03435 (recD)
DNA repair and recombination proteins [BR:
etc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ETAC_03435 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
Helicase_RecD
SH3_13
AAA_11
AAA_22
UvrD-helicase
PhoH
AAA_16
SLFN-g3_helicase
AAA_28
UvrD_C
nSTAND3
DEAD
MCD_N
Motif
Other DBs
NCBI-ProteinID:
AGH72818
LinkDB
All DBs
Position
797490..799343
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AA seq
617 aa
AA seq
DB search
MRESLLSQMAQQRTLRPLDLQFATLLAGPQQPHLALAAALVSQELAAGHVCLPLTALDTA
TLSQRFPQQADAWPALLAGWDVARWRDYLLAQPCVSGGDRATPLVVSHDCLYLQRLWRDE
GTVAAFFAAACAQPRRVDGALAPVLHRLFPATAQRPDWQQVAAAVAVTRRASVISGGPGT
GKTTTVARLLAALVALAPGRMPRIQLAAPTGKAAARLGESLGQALAALALAPDQLQAMPR
EALTLHRLLGARADSARLRYHRDNPLHLDVLVVDEASMVDLPMMARLIEALPPQAQLILL
GDRDQLASVEAGAVLGELCRFAEYGFSAARAAELSQLCDAPIPAGETQPAVALRDAISLL
RHSYRFDARSGIGQLALAVNRGDRRMAMACLADRFADLHWHEIAQDEDYQTLLTCCLAGY
RPMLEGILRGEAPAQILAEFARFRPLCALREGPFGLHGLNERIALTLQRAGLIRRAHEGQ
KHWYAGRPVMITRNDASQALFNGDIGITLGDEQSGWQVWFMGSDGAPRAVQPNRLPPHET
AWAMTVHKSQGSEFDHTLLALPTQPSPVVTRELVYTAITRARQQLTLFATRPVLERAIRT
PTERRSGLMARLLAAAD
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtctctactctcccagatggcgcagcagcgtacgctgcgcccgctggatctg
cagtttgccacgctgttagccgggccgcagcagccgcacctggcgctggccgcggcgctg
gtcagccaagagctggccgccgggcatgtctgcctgccgctgacggcgctggatacggcg
acgctgagccagcgctttccgcagcaggccgatgcgtggccagcgctgctcgccgggtgg
gacgttgctcgctggcgggactacctgctggcgcagccctgcgtcagcggtggcgatagg
gcgacgccgctggtggtcagccacgattgcctgtatctacagcgactatggcgtgatgag
ggcacggtggcggcctttttcgccgcggcctgtgcgcagccgcggcgcgtcgatggcgcg
ctggcgccggtgctgcaccgtctgttcccagccacggcccagcggccggactggcagcag
gtggccgcggccgtggcggtgacgcgccgggcgtcggtgatctccggcgggcccggcacc
ggtaaaaccacgaccgtagcgcgcctgctggcggcgttggtcgcgctggcgcccggtcgg
atgccgcgtattcagttggcggcgccgacgggcaaggcggcggcgcgtctgggtgagtcg
ctggggcaggccttggcggcattggcgctggcgccggatcagctgcaggcgatgccgcgc
gaagcgctgacgctgcatcggctgctgggtgcccgggcagacagcgcccgcttgcgctat
caccgggataatccgctgcatctggatgtgctggtggtggatgaggcttcaatggtggat
ctgccgatgatggcgcggctgatcgaggcgttgccgccgcaggcgcagctgatcctgctg
ggggatcgcgatcagctggcgtcggtggaggccggcgcggtgctgggtgagctgtgccgc
tttgccgaatatggcttcagcgccgcgcgcgcggccgagctgagccagctgtgcgatgcg
ccgatccccgccggagagacgcagccagcggtcgccctgcgtgacgccatcagcctgctg
cgtcacagctaccgcttcgacgcccgttcagggatcgggcagctggcgctggccgtcaat
cggggcgatcgccggatggctatggcgtgtctggcggaccgctttgccgatctgcattgg
cacgaaatcgctcaggatgaagactaccagacgctcttaacgtgctgtctggcggggtat
cgcccgatgctggaggggatcctgcgcggggaggccccggcgcagatcctggccgaattt
gcccgcttccgtccgctgtgcgccctgcgcgaggggccctttggcctacatggtctcaac
gagcgtatcgctctgacgctgcagcgggcggggctgatccggcgcgcgcatgaggggcaa
aagcactggtatgccgggcgtccggtgatgatcacccgcaacgacgccagtcaggcgctg
tttaacggcgatatcggtattacgctgggcgatgaacagagcggctggcaggtgtggttt
atgggcagcgacggcgcgccgcgcgcggtacagcccaaccgtctaccgccccatgagacg
gcctgggcgatgacggtgcacaagtcgcagggatcggagttcgaccatacgctgctggcg
ctgccgacccaaccgtcgccggtggtgacgcgtgagctggtgtataccgccatcacgcgg
gcgcgccagcagctgacgctctttgcgacccggccggtgctggagcgggccatccgtacg
ccgaccgaacggcgcagcgggctgatggcccgtctgctggccgccgccgattaa
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