Edwardsiella piscicida C07-087: ETAC_03635
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Entry
ETAC_03635 CDS
T02509
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
etc
Edwardsiella piscicida C07-087
Pathway
etc03030
DNA replication
etc03430
Mismatch repair
etc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
etc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ETAC_03635 (dnaE)
03430 Mismatch repair
ETAC_03635 (dnaE)
03440 Homologous recombination
ETAC_03635 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
etc03032
]
ETAC_03635 (dnaE)
03400 DNA repair and recombination proteins [BR:
etc03400
]
ETAC_03635 (dnaE)
Enzymes [BR:
etc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ETAC_03635 (dnaE)
DNA replication proteins [BR:
etc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ETAC_03635 (dnaE)
DNA repair and recombination proteins [BR:
etc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ETAC_03635 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AGH72858
LinkDB
All DBs
Position
838733..842221
Genome browser
AA seq
1162 aa
AA seq
DB search
MAEPRFIHLHVHSDYSMIDGLAKTAPLVKKVAALGMPAFAITDHTNLCGLVKFYGSAHGA
GIKPLVGADVLVRSETMGDELSALTILACDNEGYQNLTQLISHAYQRGYGAEGPTIDRDW
LIAYRAGLILLSGARHGDVGKLLLRGNQTLVGECVDFYQQHFPDSYFLELVRTGRPDEES
YLHLAVELAQQRDLPLVATNDVRFLEASDFDAHEIRVAIHDGYTLDDPKRPRNYSAQQYM
RSEEEMCELFADLPEALQNSVEIAKRCNVTIRLGQYFLPQFPTGEMSTEDFLVKKAHEGL
EERLSFLFPDEADRARLRPPYDERLEIELKVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYSLKITDLDPLAFDLLFERFLNPERVSMPDFDVDFCMEKRDRVIDHVAD
MYGREAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVRALIDMARKLEGVTRNAGKHAGGVVISPTKITDFAPLYCDAEGNHPVTQ
FDKSDVEYAGLVKFDFLGLRTLTIINWALEMINARRARQGLDPVDIAAIPLDDQKSFDIL
QRAETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
LSYPDREWQHESLKPVLEPTYGVILYQEQVMQIAQVLAGYSLGGADLLRRAMGKKKPEEM
AKQRSVFEEGARNNGVNGELAMHIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHYPA
EFMAAVMTADMDNTDKVVGLVDECWRMGLKILPPDINSGQYHFHVNDEGEIVYGIGAIKG
VGEGPIEAIIEARNSGEQGYFKDLFDLCARTDTKKLNRRVMEKLIMSGAFDRLGPHRAAL
MSSLNDALKAAEQHARAEAIGQADMFGVLAEEPEQVEQSYGSVPPWPVQMVLDGERETLG
LYLTGHPITQYLKEIERYAGGGRLKDMHPTDRGKMTTAVGLVLGARVMTTKRGNRIGMCT
LDDRSGRLEVMLFTDALEKYQHLLEKDRILIASGQVSFDDFSGGLKMIARELMDISEARE
KYARGLAISLTDRQIDDQLLNRLREALEPHRSGTIPVHLYYQRADARARVRFGAAWRVTP
TDRLLLDLRTLVGCEQVELEFD
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaccacgttttatacatctgcatgtgcacagtgactattcgatgattgacggg
ctggctaaaaccgcgccgctggtcaagaaggtcgccgcgctggggatgcccgccttcgcg
atcacggaccataccaacctgtgcgggctggttaagttttatggcagcgcgcacggcgcc
gggatcaagccgctggtcggcgccgatgtcctggttcgcagcgagacgatgggcgatgag
ctgtcggcgctgacgattctggcctgcgataatgagggctaccagaatctgacccagctt
atctcacacgcttaccagcgcggctatggcgccgaggggcctacgatcgatcgcgattgg
ctgatcgcgtaccgcgcagggctgattttgctctccggcgcccgtcacggcgacgtgggt
aagctgctgctgcgcggtaatcagacgctggtcggtgagtgcgtggatttctaccaacag
cactttccggatagctactttttagagctggtgcgcaccgggcgccccgatgaggagagc
tacctgcacctggcggtggagctggcgcagcagcgtgatttaccgctggtagcgaccaac
gacgtccgcttcttggaggcctcggactttgacgcccatgagatccgcgtggcgatccac
gacggctacaccttagacgatcccaagcgtccgcgtaactatagcgctcagcaatacatg
cgcagcgaggaggagatgtgcgagctgttcgccgatctgcccgaagcgctgcagaacagc
gtagagattgctaagcgttgtaatgtgaccatccggctcggccagtattttctgccgcag
ttccccaccggggagatgtcgacggaggatttcctggtgaagaaggcgcacgaggggctg
gaggagcgtctttcgttcctgttccccgatgaggcggaccgcgcacgactgcgcccgcct
tacgatgagcgtctggagatcgagctgaaggtgatcaaccagatggggttccccggctac
ttcctgatcgtgatggagtttatccagtggtctaaggataacggggttccggtggggccg
gggcgcggctccggcgccggttcgctggtggcctattcgctgaagattaccgacctcgat
ccgctggccttcgatctgctgttcgaacgtttcctcaacccggaacgcgtctccatgccc
gactttgacgtcgacttctgcatggagaagcgcgatcgggttatcgatcacgtcgccgat
atgtatggccgcgaagcggtatcgcagatcatcaccttcggtaccatggcggccaaggcg
gtgatccgcgacgtgggacgcgtgctgggtcatccctacggctttgtcgatcgcatctcc
aagctggtgccgccggatcccggcatgaccttggccaaggcctttgaggcggagccgcag
ctgccggagatctacgaggcggatgaagaggtgcgggcgctgatcgatatggcgcgcaag
ctggagggggtcacccgcaacgccggtaagcacgccggcggggtggttatctcgccgacc
aagatcaccgactttgcgccgctgtactgcgatgccgagggtaaccacccggtcacgcaa
ttcgacaagagcgacgtggagtatgccggcctggtgaagtttgacttcctgggcctgcgt
accctgaccatcatcaactgggcgctggagatgatcaacgcccgccgcgcgcgtcagggg
ctggatccggtggatatcgccgccattccgctcgacgatcagaagagcttcgatatcctg
cagcgcgcggagaccacggcggtattccagctggaatcgcgcgggatgaaggatctgatc
aagcgcctgaagccggactgcttcgaagatatgatcgcgctggtggcgctgttccgcccc
ggcccgctgcagtcggggatggtcgataactttatcgaccgtaagcacggtcgtgaagag
ctctcttacccagaccgcgagtggcagcatgagagtctgaagccggtgctggagccgacc
tacggcgtgatcctgtatcaggaacaggtgatgcagatagcccaggtgctggccggctac
tcgctgggcggcgccgacctgctgcgccgtgcgatgggtaagaaaaagcccgaggagatg
gccaagcagcgttcggtgtttgaagagggcgccaggaacaacggcgtcaacggcgagctg
gcgatgcacatcttcgacctggtggagaagttcgccgggtatggctttaacaagtcgcac
tccgctgcctatgcgctggtctcttaccagacgctgtggctgaaaacccactatccggcc
gagtttatggcggcggtgatgaccgccgatatggataacaccgataaggtggtcgggctg
gtggatgagtgctggcgcatggggctgaagatcctgccgccggacatcaacagcgggcag
taccacttccacgtcaacgatgagggcgagatcgtctacggtatcggcgccatcaaaggg
gtgggggaggggcctatcgaggcgatcatcgaggcgcgcaacagcggcgaacagggctat
tttaaggatctgtttgacctgtgcgcccgcaccgataccaagaagctgaaccgtcgagtg
atggagaagctgatcatgtccggtgccttcgatcgcctggggccgcaccgcgcggcgctg
atgagctcgcttaacgatgcgctgaaggccgccgagcagcacgcccgcgccgaggccatc
gggcaggcggacatgtttggcgtgctggcggaagaaccggagcaggtggagcaatcctat
ggcagcgtgccgccttggccagtccagatggtgctggacggtgagcgcgagaccctgggg
ctgtacctgaccggccatccgatcacccagtatctgaaagagatcgaacgctatgccggc
ggcggtcgtctgaaggatatgcacccgacggatcgtggtaagatgaccaccgccgtgggg
ctggtgctgggcgctcgggtgatgaccaccaagcgtggtaaccgcatcggaatgtgcact
ctggacgatcgctccggccgtctggaggtgatgctgttcaccgatgcgctggaaaaatac
cagcatttgctggagaaagaccgtatcctgatcgccagcggacaggtcagctttgatgac
ttcagcggcggccttaaaatgatcgcccgcgagttaatggatatcagcgaagcccgtgaa
aaatatgcacgcggacttgccatctcgctgactgacaggcaaattgatgatcagctttta
aaccgtctccgtgaagcgctggaaccacatcgttcggggacgatcccagtacacctgtat
tatcagcgtgcggatgcgcgggcccgggttcgcttcggtgcagcctggcgcgtgacgccg
acggatcgcctgctgctcgatctgcgcacgctggtgggatgtgaacaggtggaactggaa
tttgactaa
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