Edwardsiella piscicida C07-087: ETAC_05140
Help
Entry
ETAC_05140 CDS
T02509
Name
(GenBank) Exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
etc
Edwardsiella piscicida C07-087
Brite
KEGG Orthology (KO) [BR:
etc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
etc03400
]
ETAC_05140
DNA repair and recombination proteins [BR:
etc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ETAC_05140
Archaeal homologous recombinant proteins
ETAC_05140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
ABC_tran
nSTAND3
cobW
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AGH73155
LinkDB
All DBs
Position
complement(1181140..1184841)
Genome browser
AA seq
1233 aa
AA seq
DB search
MRILSLRFKNINSLRGEWKIDFSAPPFCDSGLFAITGATGAGKTTLLDAICLALYHQTPR
LDTISASQNELMTRGTAESLAEVEFEVKGIGYRAFWSQRRANNRPDGKLQAIRAELARLD
DGTILCDKISDKLKTIAELTGLDFGRFTKSMMLSQGEFAAFLNADAGKRAELLEELTGTE
IYGRLSEAVFARFKQAKSDLDALRERAAGVELLSDAQREALQASLTHAQTQEQALRAQLT
QAQQQQAWLRRQQEQRQALSQAQTQAAQAEQHWLALQPQLLRLTHAEPALRLRPYYQSLT
QAEEDLRQADAQQHQLEARLQAAAAQRAPLQQALQQAQQAWQQLRQRRDETQALIAERVL
PLDNALSKQEEAEQRLSQQWQESQRQLQDLQAQQQQLSAQQEAQRQQHAALQRQLDAARQ
HAQWGERLPRWQMLLERRGVLSDDGLRLSAERTRLQQEIQHLCRQRDARQETLLGLQQDE
QRLRQALETQEAELQAWQRHHPAEHVTQARTTLQQGDDDRQQLIALQPLALQEMARIQAL
QARDGALQRERLILEQQLAEKRRQYADKRQHLQDLEQQIALQMRLISLETERASLREGEP
CPLCGACDHPLAARYQPPALSDSQRRRDRLSQEVERLGREGGALSERAAQAAAQCAQLES
EAQQLQQTLTQQRARWQQICDALGLALALEDETALADYLQRCAQRRRELDSLQAQGEALA
QRLQRARDALTQASGRLSQEQHAQSLLLQTLQTQETRRAECERQWQQTEQEQQSLTQQIA
DDLADGELTAPDAAQSERWLAARRDEWQRWQQAQAQHQQLQTQALSLEQQLRLLQQQLTT
QTQHHETLTRERQTLDEQRALLLAQRRALLDGRPIADVQAELLHQEQALEQRQSAALAES
QRWQQQYERLEGELSAARQQQQTLTQRLLPLRQRWQSALADSPFSDDAALLAAMLTEEEQ
RQLTALRDDAQRQRQQSAALLAQAQQAVAQGEATRPQELHIDDDDPWLEQRCSALTQQLR
QHSLQQGELQQQLHSDTQRRHSQQGWLAEIAQRERAYQDWSYLNQLIGSSSGDKFRKFAQ
GLTLDHLVYLANRQLMRLHGRYQLLRREGDTLELEVVDTWQADARRDTRTLSGGESFLVS
LSLALALSDLVSHKTRIDSLFLDEGFGTLDAETLDTALDALDTLNASGKTIGVISHVEAM
KERIPLQIRVKKINGLGFSRLDSRYRVSGDGES
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgaggatcctcagtctacgctttaagaacatcaactcgctgcgcggcgagtggaaaatt
gacttcagcgccccccccttctgcgatagcgggctgtttgccattaccggcgccaccggc
gcgggaaaaaccaccctgctggacgccatctgtctggcgctgtaccaccagaccccgcgt
ctggacaccatctccgccagccagaatgagctgatgacccgcggcaccgccgaatccttg
gccgaggtggagtttgaggtcaaggggataggctaccgcgccttttggagccagcggcgc
gccaacaaccgccccgacggcaagctgcaggcgatacgcgccgagctggcgcggctggat
gacggtacgatcctgtgcgataaaatcagcgataagctaaaaaccatcgccgaactgacc
ggcctggactttggccgctttaccaagtcgatgatgctgtcgcaaggggagttcgccgcg
ttcctcaacgccgatgccggcaaacgcgccgagctgctggaggagctgaccggtaccgag
atctacgggcgcctctccgaggcggtcttcgcccgctttaagcaggccaagagcgatctg
gacgcgctgcgcgaacgcgccgccggcgttgagctgctcagcgacgcccagcgcgaagcg
ctgcaggccagcctgacccacgcccaaacgcaggagcaggcgctgcgcgctcagctgacg
caggcgcagcagcagcaagcgtggctacggcgtcagcaggagcagcgccaggcgctgagc
caggcacagacgcaggccgcccaggccgagcagcactggctcgcccttcagccgcagctg
ctgcggctgacccacgccgaacccgcgctgcggctgcggccgtattaccagagcctgacc
caggccgaggaggatctacgccaggccgacgcccagcagcatcagctggaggcgcgtcta
caggcggcggccgcccagcgggcaccgctgcagcaggcgctacagcaggcgcagcaagcc
tggcagcagctgcgccagcgccgtgatgaaacgcaggcgctgatcgccgagcgagtgcta
ccgctggacaatgcgctgagcaaacaggaggaggccgaacagcggctgtcgcagcagtgg
caggagagtcagcgccagctgcaggatctgcaggcgcagcaacagcagctcagcgcgcag
caggaggcccagcgacagcagcacgccgcgctgcagcggcagctggacgccgcccggcag
cacgcccagtggggcgaacggctgccgcgctggcagatgctgctggagcgccgcggcgtg
ctcagcgacgacgggctacggctgagcgccgagcggacgcggctgcagcaggagatacag
cacctgtgccgccagcgcgatgctcgccaggagaccctgcttggcctgcagcaggacgag
cagcgcctgcgtcaggcgctggagacgcaggaggccgagctgcaagcgtggcagcgccac
caccccgccgaacacgtaacgcaggcgcgaacgaccctgcagcagggcgatgacgatcgc
cagcagctgatcgcgctgcagccgctggccctgcaggagatggcgcgcatacaggcgctg
caggcgcgcgatggcgcactgcagcgcgagcgtctaatcctggagcagcagctcgcggag
aagcggcgtcagtacgcggataagcgccagcacctgcaggatctggaacagcagatagcg
ctgcagatgcgactgatcagcctggaaacggagcgcgccagcctgcgtgagggcgaaccc
tgcccgctgtgcggcgcatgcgatcacccgctggcggcccgctaccagcccccggcgctc
agcgacagccaacggcgccgcgatcgcctcagccaggaggtcgagcgcctgggacgggaa
ggcggagcgctgagcgaacgcgcggctcaagccgcggcgcagtgcgcccagttggaaagc
gaagcccagcagctgcagcagacgctgacccagcagcgcgcgcgctggcagcagatctgt
gacgcgctggggctagcgctggcgctggaggatgagacggccctcgccgactacctgcag
cgctgcgcccagcggcgccgcgagctggacagcctgcaggctcagggagaggcactggca
cagcgcctgcagcgggcgcgcgacgccctgacccaggccagcgggcggctgagccaggag
cagcatgcgcaaagtctgctgctgcagacgctgcaaacccaggagacccgccgcgcggag
tgcgagcgccaatggcaacagaccgagcaggagcagcagagtctgacacagcagatagcc
gacgatctggccgacggcgaactgacggcgcccgatgccgcacagagcgagcgctggctg
gcggcgcgacgcgacgagtggcagcgttggcagcaggcgcaggcgcagcaccagcagctg
cagacccaggcgctcagcctagagcagcagctacgcctgctgcagcagcagctgacgacg
cagacacagcaccacgagacgctgacgcgcgagcgtcagacgctggatgagcagcgggcc
cttctgctggcccagcggcgcgccctgctcgacggccgcccgatcgcggacgttcaggcc
gagctgctgcaccaagagcaggcgctggagcagcgtcagagcgccgcgctggcggaaagt
cagcgctggcagcagcagtatgagcgactggagggcgagctgagcgccgcccgccagcag
cagcagacactgacccagcgcctgctgccgctgcgtcagcgctggcagtctgcgctggcc
gactccccctttagcgacgacgccgctctgctggctgcgatgctgacggaagaggagcag
cggcagctcacggcactgcgcgacgacgcccagcggcagcggcagcaaagcgcggccctg
ctggcgcaggctcagcaggccgttgcccagggtgaggcgacccgcccgcaggagttgcat
atcgacgacgacgacccgtggctggagcagcgctgtagcgcactgacgcagcagctacgc
cagcacagcctgcagcagggcgagctgcagcagcagctgcacagcgacacccagcggcgc
cacagccagcagggctggctggccgagatagcccagcgcgaacgggcgtatcaggactgg
agctacctcaatcagctgatcggctccagcagcggcgacaagttccgcaagtttgctcag
gggctgacgctggaccatctggtctatctggccaaccgccagctgatgcgcctgcacgga
cgctaccagctgctgcgccgagagggcgacaccctggaactggaggtcgtcgatacctgg
caggcggatgcgcggcgcgatacccgcaccctctccggcggcgaaagtttcttggtcagc
ctgtccctggccttggcgctgtcggatctggtcagtcacaagacccgcatcgactcgctg
tttctggatgagggatttggcacgctggatgccgagacgctggataccgcgctggacgcg
ctggataccctgaacgccagcggtaaaaccatcggcgtcatcagccacgttgaggcgatg
aaggagcggatcccgctgcagatccgggtgaagaaaatcaacggactgggctttagccgc
ctcgacagtcgctatcgcgtcagcggcgacggggagtcataa
DBGET
integrated database retrieval system