Edwardsiella piscicida C07-087: ETAC_06865
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Entry
ETAC_06865 CDS
T02509
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
etc
Edwardsiella piscicida C07-087
Brite
KEGG Orthology (KO) [BR:
etc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
etc03016
]
ETAC_06865
Enzymes [BR:
etc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
ETAC_06865
Transfer RNA biogenesis [BR:
etc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ETAC_06865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
AGH73494
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All DBs
Position
1567636..1568736
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AA seq
366 aa
AA seq
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MITSSSALKEVCERASACPYIALDTEFVRTRTYYPQLGLVQLYDGETLSLIDPLPISDWQ
PFVDLLRNPQVVKLLHAGSEDLEVFLHDFQTLPQPLIDTQILAAFTGRPLSSGFAAMVSA
YLQVDLDKSESRTDWLARPLSERQCDYAAADVYYLLPMAHKLLAEVEACGWLPAALDECQ
ALCRRRAETVDPTLAYRDMTNAWQLRPRQLACLQLLGEWRLNQARTRDMAVNFVVREESL
WLVARYMPGSMAELSEIGVSGPEIRYHGKALLEIVERSAALEEAQLPPAVERLIDHPGYK
QAFKHIKTLVQQVAEQKGLTAELLASRRQINQLLSVHWQLKTEQPELLSGWRGQLLADGL
NGVLTK
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
ttgattacctccagcagtgcgctgaaagaggtctgtgaacgcgccagcgcctgcccctat
atcgcgctggatacggagtttgtccgcacccgtacctactatccccagctggggctggtg
cagctgtatgacggtgagacgctgtcactcatcgatccgctgccgatctccgactggcag
ccgtttgtcgatctgctgcgtaacccgcaggtcgtcaaactgctgcacgccggcagcgaa
gatctggaggtcttcctgcatgacttccagactctgcctcagccgctgatcgacacccag
atcctggctgcctttaccggtcgcccgctctccagcggctttgccgccatggtcagcgct
tatctgcaggtggacctggataagagcgagtcgcgcaccgactggctggcccgtccgcta
agcgagcgtcagtgcgactatgccgcggcagacgtctattacctgctgccgatggcgcac
aagctgctggccgaggttgaggcctgcggctggctgccggcggcgctcgacgagtgccag
gctctgtgccgccgtcgcgccgaaacggtggatccgacgctggcctaccgggatatgacc
aatgcctggcagctgcgtccgcgtcagctggcctgcctgcagctgctgggcgagtggcgc
ctgaatcaggcccgcacccgcgatatggcggtgaacttcgtggtgcgtgaggagagcctg
tggctggtggcacgctacatgccgggctcgatggccgagctgagcgaaatcggcgtcagc
gggccggagatccgctatcacggtaaggcgctgctggagatcgtcgagcgcagcgccgcg
ctggaagaggcgcagctgccgcccgccgtcgagcgtctgatcgaccacccgggctataag
caggcgtttaagcacattaagacgctggtgcagcaggtggcagagcagaaagggctgacg
gcggagctgctggcgtctcggcgccagatcaatcagctgctgagcgtacactggcagctg
aagacggagcagccggagctgctgagcggctggcgcggtcagttgctggccgatgggctg
aatggcgtactgacaaaatag
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