Edwardsiella piscicida C07-087: ETAC_12245
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Entry
ETAC_12245 CDS
T02509
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
etc
Edwardsiella piscicida C07-087
Pathway
etc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
etc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ETAC_12245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
etc03400
]
ETAC_12245
DNA repair and recombination proteins [BR:
etc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ETAC_12245
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ETAC_12245
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
UB2H
HEM4
SBDS_domain_II
DUF87
Motif
Other DBs
NCBI-ProteinID:
AGH74570
LinkDB
All DBs
Position
complement(2758645..2760663)
Genome browser
AA seq
672 aa
AA seq
DB search
MSKAFKLHSAFQPSGDQPEAIRRLEAGLEDGLAHQTLLGVTGSGKTFTIANVIADLNRPT
MVMAPNKTLAAQLYGEMKQFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTQGMLIDQRSILRRLSELQ
YARNDQAFARGTFRVRGEVIDIFPAEADDEALRVELFDDEVERLSLFDPLTGQLLRTVPR
FTVYPKTHYVTPRERILQAMEEIRAELATRRQSLLANNKLLEEQRLAQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEPPPTLFDYLPADGLLVIDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPLRFEEFEALAPQTIYVSATPGNYELEKSGDEVIDQVVRPTGLLD
PLIEVRPVATQVDDLLSEINQRAAIGERVLVTTLTKRMAEDLTEYLEEHGVRVRYLHSDI
DTVERMEIIRDLRLGEFDALVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNLNGKAILYADKMTPSMARAIGETERRRERQQAFNLAHGITPQALNKKVTDILQLG
DAPSRSRAKGTRGQRAAEPRTDYRDLSAKQIEQQIQRLETQMYQHAQNLEFEQAAALRDE
IHILREQFKNAP
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagccttcaaactgcattccgcctttcagccctccggcgatcagccagaggct
atccgccgtctggaagcggggttagaggatgggctggcgcatcagaccctgctgggggtg
accggctcgggcaagacgtttaccatcgccaacgtgatcgccgatcttaaccggccaacc
atggtgatggcgcccaacaagacgctggccgcccagctgtacggggagatgaagcagttc
ttcccggaaaatgcggtggagtactttgtctcctactacgactactatcagccggaagcc
tatgtgcccagctcggatacctttatcgaaaaggacgcgtcggtcaacgagcacattgaa
cagatgcgcctgtcggccaccaaggcgctgctggagcggcgcgacgtggtggtcgtcgcc
tcggtctccgcgatttacggcctgggcgatcccgatctgtacctgaagatgatgctgcac
ctgacccaggggatgctgatcgatcagcgcagcattctgcgccgcctctccgagctgcag
tatgcccggaacgatcaggcgtttgcgcgcgggacctttcgggtgcgcggcgaggtgatc
gacatcttcccggcggaggccgacgacgaggcgctgcgggtggagctgtttgatgacgag
gtggaacgcctgtcgctgttcgatcccctcaccgggcagctgctgcgcacggtgccgcgc
tttaccgtctacccgaagacccactatgtgaccccgcgcgaacgcatcctgcaggcgatg
gaggagatccgcgccgagctggcgacgcgccgtcagtcgctgctggccaataacaagctg
ctggaagagcagcgtctggcccagcgcacccagttcgatctggagatgatgaacgagctg
ggctactgctcggggatcgaaaactactcccgctatctctccgggcgcgggcccggtgag
ccgccgccgaccctgtttgactacctgccggcggacggcctgctggtgatcgatgagtcc
catgtcaccatcccgcagatcggcggaatgtaccgcggcgaccgggcgcggaaagagacg
ctggtggagtatggctttcgcctgccgtcggcgctggataaccgcccgctgcgctttgag
gagttcgaggcgctggcgccgcagaccatctatgtgtcggcgaccccgggtaactacgag
ctggagaagtcgggcgacgaggtgatcgatcaggtggtgcgcccgacggggctgctcgat
ccgctgatcgaggtgcgcccggtggcgacccaggtggacgacctgctgtcggagatcaat
cagcgcgccgccatcggcgagcgggtgttggtgaccaccctgaccaagcggatggccgaa
gatttgaccgagtatctggaggagcacggcgtgcgcgtgcgctacctgcactccgatatc
gacaccgtcgagcgcatggagatcatccgcgatctgcgcctgggcgagtttgacgcgctg
gtggggatcaacctgctgcgcgaggggctggatatgccggaggtgtcgctggtggcgatt
ctggacgcggacaaggagggcttcctgcgctcggagcgttcgctgattcagaccatcggc
cgagcggcgcgtaacctgaatggcaaggcgatcctctatgccgacaaaatgaccccgtcg
atggcgcgggcgatcggagagacggagcgccgccgcgagcgccagcaggcctttaacctg
gcgcacggcatcacgccgcaggcgctgaacaagaaggtcacggatatcctgcagctgggc
gacgcgccgtcgcgcagccgggccaaagggacgcgcggacagcgtgcggcagagccgcgt
acggactaccgcgatctgtcggcgaagcagatcgagcagcagatccagcgtctggagacg
cagatgtaccagcatgctcagaacctggagtttgagcaggccgccgcgctgcgcgacgag
atccacattctgcgcgagcagtttaagaatgcgccctag
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integrated database retrieval system
