Edwardsiella piscicida C07-087: ETAC_13130
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Entry
ETAC_13130 CDS
T02509
Symbol
rumA
Name
(GenBank) 23S rRNA m(5)U1939 methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
etc
Edwardsiella piscicida C07-087
Brite
KEGG Orthology (KO) [BR:
etc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
etc03009
]
ETAC_13130 (rumA)
Enzymes [BR:
etc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
ETAC_13130 (rumA)
Ribosome biogenesis [BR:
etc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ETAC_13130 (rumA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
TRAM
PCMT
TRM5-TYW2_MTfase
Cons_hypoth95
MTS
Methyltransf_11
Methyltransf_ANTKMT
Methyltransf_15
RrnaAD
Methyltransf_4
Ubie_methyltran
Methyltransf_23
FtsJ
Methyltr_RsmB-F
UPF0020
Methyltransf_37
PrmA
NodS
Motif
Other DBs
NCBI-ProteinID:
AGH74747
LinkDB
All DBs
Position
complement(2953942..2955258)
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AA seq
438 aa
AA seq
DB search
MAQFYTPGRRTATRKNLIVTATDLDAFGQGVARDKGKTLFISGLLPGEEAEVILSEEKRQ
FARGRVTRLISHSPQRVAPRCPHAGVCGGCQQQHAAIALQQQSKSQALQRLMARETGVEI
APQVIAGEPYGYRRRARFGLQFNAKTQRVVLGFRQAASNDLVALKACPVLAPALEALLLP
LGECLSALRARRRLGHLELALADNGPLMVLRHLDPLALSDREALSAFARQRGLSLYLSDG
GAPQRLLGEAPYYQIDGIRLDFNPQDFIQVNAAVNAQMVEQALAWLDVRADERVLDLFCG
MGNFTLPLARRAQRVVGVEGVPELVATAQNNARNNGLSNVEFFHQNLEEDVTRQAWAAQG
FDKILLDPARAGAPGVMQHIVRLVPRRVVYISCNPTTLARDSKTLLQGGYRLTRLCMLDM
FPHTGHLESMALFESAAQ
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggctcaattttacacaccggggcgccgtaccgcgacccggaaaaacctgattgtgacc
gcaaccgatctggacgcctttggccagggggtggcgcgcgataagggcaagacgctgttt
atcagcggactgctgcccggcgaagaggccgaggtcatcctgagcgaagagaagcgccag
tttgctcgcgggcgggttacgcgtttaatcagccacagcccgcagcgggtggcgccgcgc
tgcccccacgccggcgtctgcggcggctgtcagcagcagcatgcggcgatcgccctgcag
cagcagagcaagtcgcaggcgctgcagcgcctgatggcccgtgagaccggggtggagatt
gcgccgcaggtcatcgccggagagccctacggctaccggcggcgcgcccgctttgggcta
cagtttaacgcgaagacgcagcgggtggtgctggggttccgtcaggcggcctctaacgat
ctggtggccctgaaggcctgtccggtgctggcgcccgcgctggaggcgctgctgctgccg
ctgggcgagtgtctgtcggcgctgcgcgcgcgtcgccgtctgggacacctggagctggcg
ctggccgacaatgggccgctgatggtgctgcgccatctggatccgctcgcgctgtcggat
cgggaggccctgagcgcctttgcccgccagcgcgggctctcgctttacctgagcgacggc
ggcgcgccgcagcgcctgctcggcgaggcgccctattaccagattgacgggatccgcctg
gattttaatccgcaggactttatccaggtgaacgccgcggtaaatgcgcagatggtcgag
caggccttggcctggctggacgtcagggccgatgagcgcgtgctggatctgttctgcggc
atgggtaactttaccctgccgctggcgcgccgcgcccagcgggtggtgggggtcgaaggg
gttcccgagctggtggcgacggcgcagaataatgcacgtaacaacgggctgagtaatgta
gaattcttccatcagaatttggaggaggacgtgacgcgtcaggcctgggcggctcaggga
tttgacaagattttgctcgatccggcgcgcgccggcgcccccggggtgatgcagcatatc
gttcgcctggtgccgcgtcgggtagtctatatctcttgtaacccgaccacgctggcccgg
gacagtaagacgctgctgcagggcggctatcggttgacgcgtttatgtatgctggacatg
tttccccacacggggcatttggagtcgatggcgctgtttgaatcggcggcgcaatag
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