Edwardsiella piscicida C07-087: ETAC_13160
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Entry
ETAC_13160 CDS
T02509
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
etc
Edwardsiella piscicida C07-087
Pathway
etc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
etc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
ETAC_13160 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etc03019
]
ETAC_13160 (rnc)
03009 Ribosome biogenesis [BR:
etc03009
]
ETAC_13160 (rnc)
03036 Chromosome and associated proteins [BR:
etc03036
]
ETAC_13160 (rnc)
Enzymes [BR:
etc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
ETAC_13160 (rnc)
Messenger RNA biogenesis [BR:
etc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ETAC_13160 (rnc)
Ribosome biogenesis [BR:
etc03009
]
Eukaryotic type
90S particles
RNase
ETAC_13160 (rnc)
Prokaryotic type
rRNA processing factors
ETAC_13160 (rnc)
Chromosome and associated proteins [BR:
etc03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
ETAC_13160 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AGH74753
LinkDB
All DBs
Position
complement(2961192..2961872)
Genome browser
AA seq
226 aa
AA seq
DB search
MNPIVINRLQRKLGYTFRQQDLLMQALTHRSASSKHNERLEFLGDSILSFVIANALYHRF
PRVDEGDMSRMRATLVRGNTLAEMAREFDLGECLRLGPGELKSGGFRRESILADTVEALI
GGIFLDSDIQTIERLILDWYHSRLEEISPGDKQKDPKTRLQEFLQGRHLPLPSYLVVQVR
GEAHDQEFTIHCQVSGLSAPVVGVGSSRRKAEQAAAEQALKQLELE
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccatcgtaataaaccggcttcagcgtaagctgggctacacttttagacagcag
gatctgctgatgcaggcgctgacccatcgcagcgccagcagtaaacataatgaacggctt
gagtttttgggcgactcgatcctgagctttgtgatcgccaatgcgctctatcaccgcttc
ccgcgggtggatgaaggcgatatgagccggatgcgcgccacgctggtgcgcggtaacacc
ctggccgaaatggcgcgcgagttcgatctgggcgagtgcctgcgcctgggaccgggcgag
ctgaagagcgggggcttccgccgtgagtcgatcctggcggataccgtagaggcgctgatc
ggcggcattttcctcgacagcgatattcagaccatcgagcgtctgatccttgactggtat
cactcccgtctggaggagataagcccgggcgacaagcagaaggatcccaagacgcgcttg
caggagtttctgcaggggcgccacctgccgctgccctcctatctggtggtgcaggtgcgc
ggtgaggcgcacgaccaagagtttaccattcactgccaggtcagcgggctgtccgcgccg
gtagtcggcgtcggctccagccggcgcaaggccgagcaggccgccgccgagcaggcgtta
aaacagttggagcttgaatga
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