Edwardsiella piscicida C07-087: ETAC_13855
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Entry
ETAC_13855 CDS
T02509
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
etc
Edwardsiella piscicida C07-087
Brite
KEGG Orthology (KO) [BR:
etc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
etc03016
]
ETAC_13855 (truD)
Enzymes [BR:
etc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
ETAC_13855 (truD)
Transfer RNA biogenesis [BR:
etc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ETAC_13855 (truD)
Prokaryotic type
ETAC_13855 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AGH74892
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All DBs
Position
complement(3122248..3123294)
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AA seq
348 aa
AA seq
DB search
MEFSTLQYLHGRPAATGVLKAFAEDFFVAEDLGFAPDGEGEHVLVRLRKEGCNTQFVAEN
LARFARIAARSVSYAGLKDRHAVTEQWFCLHLPGRDTPDFSQFVLEGCQVLAVTRHRKKL
RIGTLRGNQFRLVLRHISDSAEVEERLRRVAAQGVPNYFGEQRFGRGGNNLQQARRWAAD
QIRVNERAKRGFYLSAARSALFNRLVSERLAAGCFSRALAGDALQLTGRGSWFVAQEAEL
ATLQQRLDAGELRITAALPGDGDGGVGGDAAEFERRVLSEYADLQALLTRERVEPARRAV
LLQPQAMAWNWWDDATVELTFDLPAGSFATSVVRELFCQENPDADLAE
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggagttttccacgctgcagtatctgcacgggcgcccggcggcgaccggagtgctcaag
gctttcgccgaggatttttttgtcgcagaggatctgggattcgccccggacggcgagggt
gagcatgtgctggttcgcctgcgtaaagaggggtgcaacacccagtttgtggcggagaac
ctggctcgctttgcccgtatcgccgcgcgctcggtcagctacgccgggctgaaggatcgt
catgcggtgaccgagcagtggttctgcctgcatctgccggggcgcgataccccagacttc
agccagtttgtgctggaggggtgccaggttctggccgtgacccgtcatcggaagaagctg
cgtatcggtacgctgcgtggcaaccagttccgcctggtgctgcgccatatcagcgatagc
gccgaggtcgaagagcgtctgcgccgggtggcggcacagggcgtgcccaactatttcggc
gagcagcgctttggccgcggcggcaacaacctgcagcaggcgcgtcgctgggccgccgat
cagattcgggttaacgagcgtgccaagcgcggcttctatctctccgcggcgcgcagcgcg
ctgtttaatcggctggtgagcgagcggctggcggcgggctgtttttctcgggccctggct
ggcgacgcgctgcagctgaccgggcgcggcagttggtttgtcgcccaagaggcggagctg
gcgacgctgcagcagcggctggacgccggcgaactgcgcattacggcggcgctgccgggc
gacggtgacggcggcgtcggcggcgatgcggcggagtttgaacgtcgagtgctgtctgag
tatgctgatctgcaggccctgctgacgcgtgagcgggtagagccggcgcgccgggcggtg
ctgctgcagccgcaggcgatggcctggaactggtgggatgacgccaccgtcgagctgacc
ttcgatctgcccgccggtagtttcgccaccagcgtggtgcgtgaactgttctgtcaggaa
aaccccgatgcggatcttgctgagtaa
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