Edwardsiella piscicida C07-087: ETAC_14965
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Entry
ETAC_14965 CDS
T02509
Name
(GenBank) regulatory protein CsrD
KO
K18765
RNase E specificity factor CsrD
Organism
etc
Edwardsiella piscicida C07-087
Brite
KEGG Orthology (KO) [BR:
etc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etc03019
]
ETAC_14965
Messenger RNA biogenesis [BR:
etc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ETAC_14965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES4
GGDEF
GGDEF_2
DUF948
Motif
Other DBs
NCBI-ProteinID:
AGH75114
LinkDB
All DBs
Position
complement(3390099..3391991)
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AA seq
630 aa
AA seq
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MRITTKFFAFITLLVALGMFLMLLGSTYSFYSQTHQRAETQLNILTAMIDQQLLTESRDS
VKRWLPVMMRSAGAVELSVYHDDRQVYYHHLPALYNPWRTNDNLRSFESPLLQHPGYRLK
MVYIEPTASYSHSLERMFPLSLSIGVMVIMLFFAYRWLRGQTQGIERLERRARRILSGDR
DLRAGGIGEFPASASSALDCLLAELSDAREERSRIDSLIRAFAAQDSRTGLNNRLFFDNQ
LTTLLEDEGAHGVVMILRLPDLEALASQPGRRQREEFRYALTNMLSTYVMRYPSGLLAHY
FQNNFAVLLPHRSLKEAEGFAAQLLASLAAIPSAPGVIADEVLHIGITLYRAGEQVESVM
DRAEQAARSATLQGGNGWFVDPIPQPEMVRGSVRWRTLLEQTLARGGARLFHKPAVTVDG
RVHHHYILPYIYDGNQPIPSAEFMPLVQQLGLAERFDRQMVSQIIPLLRRLPGQRLAFPL
TVDSLLQRSFQRWLRDTLLQSERPLRRRILIELSEADVCAHQARLGPILRLLRGLECQVV
VSQAGLRIVSTTYIKQLQVALVKLHPALVRNIDRRIENQLFVQSITGACEGTVAQVFATG
VRSKEEWRVLKEKGIAGGQGDFFAKSRPVL
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattacaaccaaattctttgccttcattaccttactggttgcgttagggatgttt
ctgatgctgctgggcagcacctatagcttttacagccagacccatcagcgcgcggagacc
cagcttaatatcctgacggcgatgatcgaccagcagctgttgaccgagtcccgcgacagc
gtaaagcgctggcttccggtgatgatgcgatcggccggcgccgttgagctgtcggtgtat
cacgacgatcgccaggtctattaccaccacctgcccgcgctgtataacccgtggcgtacc
aacgataacctgcgcagcttcgagtcgccgctgctgcagcacccgggctatcgtctgaag
atggtctacattgagccgacggccagctacagccactcgctggagcgcatgttcccgctc
tcgctctccattggcgttatggtgatcatgctgtttttcgcctaccgctggctgcgcgga
cagacccaggggatcgagcggctggagcgccgggcgcgccgcattctgtccggcgatcgc
gatctgcgcgcggggggcatcggcgagtttcccgccagcgccagcagcgcgctcgactgc
ctgctcgccgagctgtccgatgcgcgcgaagagcgcagccggatagactcgctgatccgc
gcttttgccgcgcaggactcgcgcaccgggttaaacaaccgcctgtttttcgataatcag
ctgaccaccctgctggaggatgagggggcccacggcgtggtgatgatcctgcgcctgccg
gatctggaggcgctggccagccagccggggcggcgccagcgcgaagagtttcgctatgcg
ctgaccaatatgctgtcgacctatgtcatgcgctacccctctggcctgctggcccactat
tttcagaataactttgccgtgctgctgccgcatcgctcgctgaaagaggcggagggcttc
gccgcccagctgctggcctcgctggcggccatcccctcggcgccgggggtgatcgccgat
gaggtgctgcatatcgggatcaccctgtaccgcgccggcgagcaggtggagtcggtgatg
gatcgcgccgagcaggcggcacgcagcgcgaccctgcagggcggcaacggatggtttgtc
gatccgattccgcagccggagatggtgcgcggcagcgtgcgctggcgtaccctgctggag
cagacgctggcgcgcggcggggcgcggctgttccacaagcctgcggtgacggtggacggg
cgggtgcatcaccattacatcctgccgtacatctatgacggcaatcagccgatccccagc
gccgaatttatgccgctggtgcagcagctggggctggcggagcgcttcgatcgtcagatg
gtcagtcagattattccgttgttgcgtcgcctgccgggacaaaggctggcctttccgctg
acggttgactcattattacagcgtagctttcagcgctggctgcgcgacaccctgctgcag
agtgagcgcccgctgcgccgacgcatcctgatcgagctgagcgaggcggacgtctgcgcc
caccaggcgcggctgggtccgatcctgcgcctgctgcgcgggctggagtgtcaggtggtg
gtctctcaggccgggctgcgcatcgtcagcaccacctatatcaagcagctgcaggtggcg
ctggtgaagctgcatccggcgctggtgcgcaatattgaccggcgtatcgaaaaccagctg
tttgtgcagagtatcaccggcgcctgcgagggcaccgtcgcgcaggtcttcgccaccggg
gtgcgcagcaaagaggagtggcgagttctcaaagaaaaagggatcgccggcgggcagggg
gatttttttgcaaaatcacgaccggttctctag
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