Edwardsiella tarda FL6-60: ETAF_0030
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Entry
ETAF_0030 CDS
T02091
Name
(GenBank) DNA-directed RNA polymerase omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
etd
Edwardsiella tarda FL6-60
Pathway
etd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
etd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ETAF_0030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
etd03021
]
ETAF_0030
03400 DNA repair and recombination proteins [BR:
etd03400
]
ETAF_0030
Enzymes [BR:
etd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ETAF_0030
Transcription machinery [BR:
etd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ETAF_0030
DNA repair and recombination proteins [BR:
etd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ETAF_0030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
ADM40153
UniProt:
A0A0H3DLX0
LinkDB
All DBs
Position
complement(32473..32748)
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AA seq
91 aa
AA seq
DB search
MARVTVQDAVEKIGNRFDLVLVAARRARQMQTGGKEPLVPEENDKTTVIALREIEEGLIN
NQILDVRERQEQQEQEAAELQAVTAIAEGRR
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcgtaactgttcaagacgctgtagagaaaattggtaaccgttttgacctggtg
ttggtcgcagcccgtcgcgcgcgccagatgcagacgggcggcaaagagccgctggttccg
gaagagaacgataagaccacggttatcgccctgcgcgaaatcgaagaaggtctgatcaac
aaccagatcctcgacgtgcgtgagcgtcaggagcagcaggagcaggaagctgccgagctg
caggcggtaaccgccattgcggaaggtcgtcgttaa
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