Edwardsiella tarda: ETAF_0103
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Entry
ETAF_0103 CDS
T02091
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
etd
Edwardsiella tarda
Pathway
etd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
etd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ETAF_0103 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etd03019
]
ETAF_0103 (recQ)
03400 DNA repair and recombination proteins [BR:
etd03400
]
ETAF_0103 (recQ)
Enzymes [BR:
etd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ETAF_0103 (recQ)
Messenger RNA biogenesis [BR:
etd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ETAF_0103 (recQ)
DNA repair and recombination proteins [BR:
etd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ETAF_0103 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Response_reg
Motif
Other DBs
NCBI-ProteinID:
ADM40226
UniProt:
A0A0H3DQC3
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All DBs
Position
111086..112915
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AA seq
609 aa
AA seq
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MATAAVINTERLAEGVLKDTFGYQQFRPGQQAIVEAAIAGRDCLVVMPTGGGKSLCYQIP
ALVRDGLTIVVSPLISLMKDQVDQLQANGVNAACLNSTLNREQQQAVYAGCRSGEIRLLY
IAPERLMMDNLLDTLPQWNPTLLAVDEAHCISQWGHDFRPEYSALGQIKRRFPQMPVIAL
TATADDATRQDILGLLDLRDPLVQVSSFDRPNIRYTLIEKFKPLDQLWHFVQSQRGKSGI
IYCNSRAKVEDTAARLQSRGLSVGAYHAGLDNGRRAEVQEAFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEALLFYDPADMAWLRRCLEEKPEGAQ
KEIERHKLNAMNAFAEAQTCRRLVLLNYFGEGRQESCDNCDICLDPPKRYDGLLDAQKAL
STVARVGQRFGIGYVVEVLRGANSARIREWGHDKLSVYGIGREHSTEHWVSILRQLIHLG
LVTQNIALHSALQLTEAARPVLRGEVALPLAVPRVINLKARSSAQKSYGGNYDRKLFAKL
RKLRKAIADEENIPPYVVFNDATLLEMAEQMPLRAGDLLSINGVGQRKLERFGAPFMTLI
REHLDEGQD
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtggcaacggcagcggttattaatacagagaggctggcagagggggtgcttaaagacacc
ttcggctatcagcagttccgcccgggacaacaggccatcgtcgaggcggcgatagccggg
cgcgactgtctggtggtaatgccaaccgggggcggaaaatccctgtgttatcaaataccg
gcgttagtgcgggatgggttgaccatcgtcgtttctccgctgatttccctgatgaaggat
caggtcgatcagctgcaggctaacggggtaaacgccgcctgcctgaactcgaccctgaac
cgtgagcagcagcaggcggtctacgccggctgccgcagcggggagatccgtctgctgtac
atcgccccagagcggctgatgatggataacctgctggatacgctgccgcagtggaatcct
acgctgctggcggttgatgaggcgcactgtatctcccagtgggggcacgatttccggccg
gaatacagcgcgctggggcagattaagcgccgtttcccgcagatgccggtgatcgcgctg
acggcaaccgccgatgacgcgacccgccaggatatcctgggcctgctcgatctgcgcgat
ccgctggtacaggtcagcagctttgaccgccccaatatccgctataccctgatcgaaaaa
tttaagccgctggatcagctgtggcactttgtgcagtcgcagcgcgggaagtcaggcatc
atctactgcaacagccgcgccaaagtagaggacaccgccgcgcgcctgcaaagccgtggc
ctgagcgtcggtgcgtatcacgcggggctggacaatggtcgccgcgccgaggtgcaagag
gcgtttcagcgcgatgatttgcagattgtggtggcgacggtggcctttggcatggggatc
aacaagcccaacgttcgcttcgtggtgcacttcgatattccgcgcaatatcgaatcctac
tatcaggagaccgggcgtgccgggcgcgacgggctgccggcggaggcgctgctgttttac
gatccggccgatatggcctggctgcgccgctgtctggaggagaagccagagggcgcacag
aaggagatcgagcgtcacaagctgaatgcgatgaatgcctttgccgaggcgcaaacctgt
cgtcgtctggtgctgctgaactactttggcgaggggcgacaggagagctgcgataactgc
gatatctgcctggatccgcccaagcgctacgatggcctgctcgatgcgcagaaggcgctg
tcgaccgtggctcgcgtcgggcagcgttttggcattggctatgtggtcgaggtgctgcgc
ggcgccaacagcgcccgtatccgcgaatgggggcacgataagctgtcggtctacggcatt
ggccgcgagcacagcaccgagcactgggtgagcattctacgccagctgatccacctgggg
ctggtgacgcagaatattgccctgcactcggcgctgcagctgacggaggcggcgcgcccg
gtcctgcggggagaggtcgccctcccgctggcggttccccgggtcatcaacctcaaggcg
cgcagcagcgcacagaagagctatggcggcaactatgaccgcaagctatttgccaagctg
cgcaagctgcgcaaggcgatcgccgacgaagagaatatcccgccctacgtcgtgtttaac
gacgcgacgctgctggagatggcggagcagatgccgctgcgggcgggcgatctgctcagc
atcaacggcgttggccagcgtaagctggagcgctttggcgcgccgtttatgaccctgatc
cgcgaacatctggatgaggggcaggactag
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