Edwardsiella tarda: ETAF_0273
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Entry
ETAF_0273 CDS
T02091
Name
(GenBank) Heat shock protein 60 family chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
etd
Edwardsiella tarda
Pathway
etd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
etd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ETAF_0273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etd03019
]
ETAF_0273
03110 Chaperones and folding catalysts [BR:
etd03110
]
ETAF_0273
03029 Mitochondrial biogenesis [BR:
etd03029
]
ETAF_0273
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
etd04147
]
ETAF_0273
Enzymes [BR:
etd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
ETAF_0273
Messenger RNA biogenesis [BR:
etd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ETAF_0273
Chaperones and folding catalysts [BR:
etd03110
]
Heat shock proteins
HSP60 / Chaperonin
ETAF_0273
Mitochondrial biogenesis [BR:
etd03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
ETAF_0273
Exosome [BR:
etd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ETAF_0273
Exosomal proteins of other body fluids (saliva and urine)
ETAF_0273
Exosomal proteins of breast cancer cells
ETAF_0273
Exosomal proteins of colorectal cancer cells
ETAF_0273
Exosomal proteins of bladder cancer cells
ETAF_0273
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ADM40397
UniProt:
A0A0H3DQU0
LinkDB
All DBs
Position
322711..324354
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGSPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI
DKAVTAAVEELKALSVPCSDSKAIAQVGTISANADDTVGQLIAEAMEKVGKEGVITVEEG
TGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAV
AKAGKPLLIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIATLTAGTV
ISEEIGMELEKATLEDLGQAKRVVINKDTTIIIDGVGEESAIQGRVTQIRQQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALV
RVAAKLVDLKGINEEQNVGIKVALRAMEAPLRQIVANAGEEPSVVTNNVKAGEGNYGYNA
ATEEYGDMIDMGILDPTKVTRSALQYASSVAGLMITTECMVTDLPKEEKADLGAAGMGGM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaatttggtaatgacgcccgcgtaaaaatgctgcgcggcgtg
aacgttctggcagacgcagtgaaagtgaccctgggtccgaaaggccgtaatgtggtcctg
gataaatccttcgggtctccgaccatcaccaaagacggcgtgtccgttgcgcgtgaaatc
gaactggaagacaagttcgagaacatgggcgcgcagatggtgaaagaagtcgcctccaag
gcgaatgacgccgccggtgacggcaccaccaccgcaaccgtactggcacaggctatcgtt
aacgaaggtctgaaagccgtggctgcgggtatgaacccgatggatctgaagcgcggcatc
gacaaagccgtgaccgccgccgttgaagagctgaaggcgctgtctgtaccgtgctctgac
tctaaagccattgcgcaggtagggaccatctccgccaacgccgacgacaccgtgggccag
ctgatcgctgaagccatggaaaaagtgggtaaagaaggcgttatcaccgttgaagaaggc
accggtctgcaggacgagctggacgtggttgaaggtatgcagttcgatcgcggctacctg
tctccgtacttcatcaacaagccggaaaccggcgccgttgagctggaaagcccgttcatt
ctgctggctgacaagaagatctccaacatccgcgaaatgctgccggtgctggaagccgtt
gctaaagccggtaagccgctgctgatcatcgccgaagacgttgaaggcgaagcgctggcg
accctggtggtcaacaacatgcgcggtatcgtgaaagtggctgcggtgaaagcgccgggc
ttcggcgatcgtcgtaaggcgatgctgcaggatatcgctaccctgaccgccggtaccgtt
atctctgaagagatcggtatggagttggaaaaagcgacgctggaagatctgggccaggct
aaacgcgtggtcatcaacaaagacaccaccattatcatcgatggcgtgggcgaagagtct
gccattcagggtcgtgttactcagatccgtcagcagatcgaagaagcgacctctgactac
gatcgtgaaaaactgcaggagcgcgtggctaaactggcgggcggcgtagccgttatcaag
gttggcgcggcaactgaagttgaaatgaaagagaagaaagcacgcgtagaagacgccctg
cacgcaacccgtgctgcggtggaagaaggcgtggtggccggcggcggcgtggcgctggtt
cgcgtagcggccaagctggttgatctgaaaggcatcaacgaagagcagaacgtcggtatc
aaggttgcgctgcgcgcgatggaagcgccgctgcgtcagatcgtggccaacgccggtgaa
gagccgtcagtggtcaccaacaacgtgaaggccggcgaaggtaactacggctataacgcg
gcgaccgaagagtacggcgacatgatcgatatgggtatcctggatccgaccaaggtaacc
cgctctgcgctgcagtacgcttcctctgttgccggtctgatgatcaccaccgagtgcatg
gtgaccgatctgccgaaggaagagaaagctgacctgggtgctgccggtatgggtggcatg
ggcggtatgggcggcatgatgtaa
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