KEGG   Edwardsiella tarda: ETAF_0304
Entry
ETAF_0304         CDS       T02091                                 
Name
(GenBank) RNA-binding protein Hfq
  KO
K03666  host factor-I protein
Organism
etd  Edwardsiella tarda
Pathway
etd02024  Quorum sensing
etd03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:etd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ETAF_0304
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    ETAF_0304
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:etd03019]
    ETAF_0304
   03036 Chromosome and associated proteins [BR:etd03036]
    ETAF_0304
Messenger RNA biogenesis [BR:etd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     ETAF_0304
Chromosome and associated proteins [BR:etd03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    ETAF_0304
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: ADM40428
UniProt: A0A0H3DMA7
LinkDB
Position
376631..376939
AA seq 102 aa
MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPVSHHSGNAGTGSAGSSYHHGGQAASQPTQGSDDAE
NT seq 309 nt   +upstreamnt  +downstreamnt
atggctaaggggcaatctttacaagacccgttcttgaacgcgctgcgtcgtgaacgtgtc
ccagtttcgatctatttggtgaatggtattaagctgcaaggccagattgagtcttttgat
cagtttgtcattctgttgaagaacacggtcagccagatggtctacaaacacgcgatctct
accgttgttccgtcccgcccggtttcccaccacagtggcaatgcgggtacgggcagcgca
ggcagcagctaccatcacggtggtcaggccgcgtctcagcccactcagggcagtgatgac
gctgaataa

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