Edwardsiella tarda: ETAF_0304
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Entry
ETAF_0304 CDS
T02091
Name
(GenBank) RNA-binding protein Hfq
KO
K03666
host factor-I protein
Organism
etd
Edwardsiella tarda
Pathway
etd02024
Quorum sensing
etd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
etd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ETAF_0304
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ETAF_0304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etd03019
]
ETAF_0304
03036 Chromosome and associated proteins [BR:
etd03036
]
ETAF_0304
Messenger RNA biogenesis [BR:
etd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ETAF_0304
Chromosome and associated proteins [BR:
etd03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
ETAF_0304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
ADM40428
UniProt:
A0A0H3DMA7
LinkDB
All DBs
Position
376631..376939
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AA seq
102 aa
AA seq
DB search
MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPVSHHSGNAGTGSAGSSYHHGGQAASQPTQGSDDAE
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggggcaatctttacaagacccgttcttgaacgcgctgcgtcgtgaacgtgtc
ccagtttcgatctatttggtgaatggtattaagctgcaaggccagattgagtcttttgat
cagtttgtcattctgttgaagaacacggtcagccagatggtctacaaacacgcgatctct
accgttgttccgtcccgcccggtttcccaccacagtggcaatgcgggtacgggcagcgca
ggcagcagctaccatcacggtggtcaggccgcgtctcagcccactcagggcagtgatgac
gctgaataa
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