Edwardsiella tarda: ETAF_0362
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Entry
ETAF_0362 CDS
T02091
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
etd
Edwardsiella tarda
Brite
KEGG Orthology (KO) [BR:
etd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
etd03016
]
ETAF_0362
Enzymes [BR:
etd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ETAF_0362
Transfer RNA biogenesis [BR:
etd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ETAF_0362
Prokaryotic type
ETAF_0362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ADM40486
UniProt:
A0A0H3DPR2
LinkDB
All DBs
Position
431248..432210
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AA seq
320 aa
AA seq
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MSRPRRRGRDINGVLLLDKGQGMSSNDVLQKVKRIYNANKAGHTGALDPLATGMLPICLG
EATKFSQFLLDADKRYRVIARLGQRTDTSDADGQVVCERPLSFSEAELAQALEGFRGPGR
QVPSMYSALKYQGRPLYEYARQGIDVPRESREITVFELRFIRWEGDELELEIHCSKGTYI
RTIIDDLGEVLGCGAHVIYLRRLQVSGYPSERMVTLEQLQALLAQAQQQERDPRLLLDPL
LLPMDTAAAHLPEVNLSEIVAGYVQLGQPVQTPDLPQSGMVRISVGAAHRFIGVGEVDDQ
GRLAPRRMVVESRLSEDDPT
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgaccccgtcgccgcggccgcgatattaacggcgtcctgctgctggataaaggg
caggggatgtcctctaacgatgtgctgcagaaggtaaagcgcatctataacgccaacaag
gcggggcataccggtgcgctggatccgctggcgaccgggatgctgccgatttgcctgggc
gaagcgaccaagttttctcagtttttgctggatgccgacaagcgctatcgtgtcatcgcc
cgcctggggcagcgtaccgatacctctgacgccgatggtcaggtggtgtgtgagcgaccg
ctgagctttagcgaggccgagctggcgcaggcgctggaagggttccgcggccctggccgc
caggtgccctccatgtactcggcgctcaagtaccaggggcgcccgctgtacgaatatgcc
cgccaggggatcgacgtgccgcgcgaatcgcgtgagatcacggtgtttgagctgcgcttt
atccgctgggaaggggatgagctggagctggagatccactgctccaagggcacctatatt
cgcactatcatcgacgatctgggcgaagtgctcggctgcggcgcgcacgttatctatctg
cggcgtctgcaggtttccggctatccgagcgagcggatggttacgctggagcagctgcag
gcgctgttggcgcaggcgcagcagcaagagcgcgatcctcgcctgctgctcgatccgctg
ctgctgccgatggatacggccgccgcgcacctgccggaggtgaatctgtcggagatcgtc
gctggctatgtacagctggggcagccggtacagacgccggacctgccgcaaagcggaatg
gtgcgcatcagcgtcggggctgcgcaccgctttatcggcgtcggcgaagtggacgatcag
gggcgcctggcgccgcgtcgtatggtggtggagtcgcgcctctccgaggacgatccgacc
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