Edwardsiella tarda FL6-60: ETAF_0510
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Entry
ETAF_0510 CDS
T02091
Symbol
yfiF
Name
(GenBank) hypothetical tRNA/rRNA methyltransferase YfiF
KO
K03214
RNA methyltransferase, TrmH family [EC:2.1.1.-]
Organism
etd
Edwardsiella tarda FL6-60
Brite
KEGG Orthology (KO) [BR:
etd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
etd03009
]
ETAF_0510 (yfiF)
03016 Transfer RNA biogenesis [BR:
etd03016
]
ETAF_0510 (yfiF)
Ribosome biogenesis [BR:
etd03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ETAF_0510 (yfiF)
Transfer RNA biogenesis [BR:
etd03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
ETAF_0510 (yfiF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
SpoU_sub_bind
Motif
Other DBs
NCBI-ProteinID:
ADM40634
UniProt:
A0A0H3DN65
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All DBs
Position
593338..594519
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AA seq
393 aa
AA seq
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MSDSLNGKNGKVKVMYVRDSDAADERQSRAPAKGRPGARGDRSRSDRNDRGDRSRSDRND
RGDRSRSDRNDRGDRSRSDRNDRGDRSRSDRSDRGDRAARPARSEQGVGERSPWRTVSLG
DNGGVGGESDHGGISGKSFIDPEQLRRQRAEETRVYGENACQALFASRPEAIVRAWFLQA
VTPRFREALRWMAANRKAYHVVDDAELTKASGTDHHGGVCFLIKKRRSLDAQQYLANQAE
DAVDCVLALENVANPHNLGGIMRTCAHFGIRGIIAPESAALESGAAVRTAEGGAEHVQAI
DAEDFSAALDTFRRAGYTIVTTSSHKGTTQLHRATLPAKIVLVVGHEGDGLSDGTLQQGD
LSVSIGGTGSVESLNVSVATGIMLAEWWRQNAR
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgagcgactctttgaatggtaaaaacggtaaagtaaaagtgatgtatgtccgcgactcg
gacgctgccgatgagcgtcagtcgcgtgcgcccgcgaagggtcgtccgggtgcgcgcggc
gaccgcagccgcagcgatcgtaatgaccgcggcgaccgcagccgcagcgatcgtaatgac
cgtggcgaccgcagccgcagcgatcgtaatgaccgcggtgaccgcagccgcagcgatcgt
aatgaccgcggcgaccgcagccgtagcgatcgcagtgaccgcggcgatcgcgcagcccgt
ccggcgcgcagtgagcagggcgtcggtgagcgttcaccgtggcgcacggtttctctgggc
gataacggtggcgtaggcggtgaaagcgatcacggtggtatcagcggtaaaagctttatc
gatccggaacaactgcgtcgtcagcgcgccgaagagacgcgagtatacggtgagaatgcc
tgccaggcgctatttgcgagccgtccggaggccatcgttcgcgcctggttcctgcaggcc
gtaacgccgcgcttccgggaggccctgcgctggatggcggctaaccgtaaggcttaccat
gtggtggacgatgccgagctgaccaaggcgtcgggaaccgatcatcacggcggcgtatgt
ttcctgattaaaaagcgtcgctctcttgatgcgcagcagtatctggccaatcaggcagag
gatgcggtggactgcgtgctggcgttggagaatgtggccaacccccataacctgggcggc
attatgcgcacctgtgcgcactttggcatccgcgggatcatcgccccggagagcgccgcg
ctggagtctggcgccgccgttcgtaccgccgaaggcggcgcggagcacgtacaggcgatc
gatgcggaagatttttccgcggcgctggataccttccgtcgcgccggctataccattgtg
acgacctccagccacaaggggacgacgcagctgcaccgtgcgacgctgccggcgaaaatc
gtgctggtggtcgggcatgaaggcgatggcctgtctgacggtacgctgcagcagggcgat
ctgagcgtctctatcggtggtaccggcagcgttgaaagcctgaatgtgtcggttgctacg
gggattatgttggccgaatggtggcgacagaatgcgcgttaa
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