Edwardsiella tarda: ETAF_1005
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Entry
ETAF_1005 CDS
T02091
Symbol
sbcC
Name
(GenBank) Exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
etd
Edwardsiella tarda
Brite
KEGG Orthology (KO) [BR:
etd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
etd03400
]
ETAF_1005 (sbcC)
DNA repair and recombination proteins [BR:
etd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ETAF_1005 (sbcC)
Archaeal homologous recombinant proteins
ETAF_1005 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
ABC_tran
nSTAND3
cobW
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ADM41124
UniProt:
A0A0H3DPC5
LinkDB
All DBs
Position
complement(1165968..1169669)
Genome browser
AA seq
1233 aa
AA seq
DB search
MRILSLRFKNINSLRGEWKIDFSAPPFCDSGLFAITGATGAGKTTLLDAICLALYHQTPR
LDTISASQNELMTRGTAESLAEVEFEVKGIGYRAFWSQRRANNRPDGKLQAIRAELARLD
DGTILCDKISDKLKTIAELTGLDFGRFTKSMMLSQGEFAAFLNADAGKRAELLEELTGTE
IYGRLSEAVFARFKQAKSDLDALRERAAGVELLSDAQREALQASLTHAQTQEQALRAQLT
QAQQQQAWLRRQQEQRQALSQAQTQAAQAEQHWLALQPQLLRLTHAEPALRLRPYYQSLT
QAEEDLRQADAQQHQLEARLQAAAAQRAPLQQALQQAQQAWQQLRQRRDETQALIAERVL
PLDNALSKQEEAEQRLSQQWQESQRQLQDLQAQQQQLSAQQEAQRQQHAALQRQLDAARQ
HAQWGERLPRWQMLLERRGVLSDDGLRLSAERTRLQQEIQHLCRQRDARQETLLGLQQDE
QRLRQALETQEAELQAWQRHHPAEHVTQARTTLQQGDDDRQQLIALQPLALQEMARIQAL
QARDGALQRERLILEQQLAEKRRQYADKRQHLQDLEQQIALQMRLISLETERASLREGEP
CPLCGACDHPLAASYQPPALSDSQRRRDRLSQEVERLGREGGALSERAAQAAAQCAQLES
EAQQLQQTLTQQRARWQQICDALGLALALEDETALADYLQRCAQRRRELDSLQAQGEALA
QRLQRARDALTQASGRLSQEQHAQSLLLQTLQTQETRRAECERQWQQTEQEQQSLTQQIA
DDLADGELTAPDAAQSERWLAARRDEWQRWQQAQAQHQQLQTQALSLEQQLRLLQQQLTT
QTQHHETLTRERQTLDEQLALLLAQRRALLDGRPIADVQAELLHQEQALEQRQSAALAES
QRWQQQYERLEGELSAARQQQQTLTQRLLPLRQRWQSALADSPFSDDAALLAAMLTEEEQ
RQLTALRDDAQRQRQQSAALLAQAQQAVAQGEATRPQELHIDDDDPWLEQRCSALTQQLR
QHSLQQGELQQQLHSDTQRRHSQQGWLAEIAQRERAYQDWSYLNQLIGSSSGDKFRKFAQ
GLTLDHLVYLANRQLMRLHGRYQLLRREGDTLELEVVDTWQADARRDTRTLSGGESFLVS
LSLALALSDLVSHKTRIDSLFLDEGFGTLDAETLDTALDALDTLNASGKTIGVISHVEAM
KERIPLQIRVKKINGLGFSRLDSRYRVSGDGES
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgaggatcctcagtctacgctttaagaacatcaactcgctgcgcggcgagtggaaaatt
gacttcagcgccccccccttctgcgatagcgggctgtttgccattaccggcgccaccggc
gcgggaaaaaccaccctgctggacgccatctgtctggcgctgtaccaccagaccccgcgt
ctggacaccatctccgccagccagaatgagctgatgacccgcggcaccgccgaatccttg
gccgaggtggagtttgaagtcaaggggataggctaccgcgccttttggagccagcggcgc
gccaacaaccgccccgacggcaagctgcaggcgatacgcgccgagctggcgcggctggat
gacggtacgatcctgtgcgataaaatcagcgataagctaaaaaccatcgccgaactgacc
ggcctggactttggccgctttaccaagtcgatgatgctgtcgcaaggggagttcgccgcg
ttcctcaacgccgatgccggcaaacgcgccgagctgctggaggagctgaccggtaccgag
atctacgggcgcctctccgaggcggtcttcgcccgctttaagcaggccaagagcgatctg
gacgcgctgcgcgaacgcgccgccggcgttgagctgctcagcgacgcccagcgcgaggcg
ctgcaggccagcctgacccacgcccagacgcaggagcaggcgctgcgcgctcagctgacg
caggcgcagcagcagcaggcgtggctacggcgtcagcaggagcagcgccaggcgctgagc
caggcacagacgcaggccgcccaggccgagcagcactggctcgcccttcagccgcagctg
ctgcggctgacccacgccgaacccgcgctgcggctgcggccgtattaccagagcctgacc
caggccgaggaggatctacgccaggccgacgcccagcagcatcagctggaggcgcgtcta
caggcggcggccgcccagcgggcgccgctgcagcaggcgctacagcaggcgcagcaagcc
tggcagcagctgcgccagcgccgtgatgaaacgcaggcgctgatcgccgagcgagtgcta
ccgctggacaatgcgctgagcaaacaggaggaggccgaacagcggctgtcgcagcagtgg
caggagagtcagcgccagctgcaggatctgcaggcgcagcaacagcagctcagcgcgcag
caggaggcccagcgacagcagcacgccgcgctgcagcggcagctggacgccgcccggcag
cacgcccagtggggcgaacggctgccgcgctggcagatgctgctggagcgccgcggcgtg
ctcagcgacgacgggctacggctaagcgccgagcggacgcggctgcagcaggagatacag
cacctgtgccgccagcgcgatgcgcgccaggagaccctgcttggcctgcagcaggacgag
cagcgcctgcgtcaggcgctggagacgcaggaggccgagctgcaagcgtggcagcgccac
caccccgccgaacacgtaacgcaggcgcgaacgaccctgcagcagggcgatgacgatcgc
cagcagctgatcgcgctgcagccgctggccctgcaggagatggcgcgcatacaggcgctg
caggcgcgcgatggcgcactgcagcgcgagcgtctaatcctggagcagcagctcgcggag
aagcggcgtcagtacgcggataagcgccagcacctgcaggatctggaacagcagatagcg
ctgcagatgcgactgatcagcctggaaacggagcgcgccagcctgcgtgagggcgaaccc
tgcccgctgtgcggcgcatgcgatcacccgctggcggccagctaccagcccccggcgctc
agcgacagccaacggcgccgcgatcgcctcagccaggaggtcgagcgcctgggacgggaa
ggcggagcgctgagcgaacgcgcggctcaagccgcggcgcagtgcgcccagctggaaagc
gaagcccagcagctgcagcagacgctgacccagcagcgcgcgcgctggcagcagatctgt
gacgcgctggggctagcgctggcgctggaggatgagacggccctcgccgactacctgcag
cgctgcgcccagcggcgccgcgagctggacagcctgcaggctcagggagaggcactggca
cagcgcctgcagcgggcgcgcgacgccctgacccaggccagcgggcggctgagccaggag
cagcatgcgcaaagtctgctgctgcagacgctgcaaacccaggagacccgccgcgcggag
tgcgagcgccaatggcaacagaccgagcaggagcagcagagtctgacacagcagatagcc
gacgatctggccgacggcgaactgacggcgcccgatgccgcacagagcgagcgctggctg
gcggcgcgacgcgacgagtggcagcgttggcagcaggcgcaggcgcagcaccagcagctg
cagacccaggcgctcagcctagagcagcagctacgcctgctgcagcagcagctgacgacg
cagacgcagcaccacgagacgctgacgcgcgagcgccagacgctagatgagcagctggcc
cttctgctggcccagcggcgcgccctgctcgacggccgcccgatcgcggacgttcaggcc
gagctgctgcaccaggagcaggcgctggagcagcgtcagagcgccgcgctggcggaaagt
cagcgctggcagcagcagtatgagcgactggagggcgagctgagcgccgcccgccagcag
cagcagacgctgacccagcgcctgctgccgctgcgtcagcgctggcagtctgcgctggcc
gactccccctttagcgacgacgccgctctgctggctgcgatgctgacggaagaggagcag
cggcagctcacggcactgcgcgacgacgcccagcggcagcggcagcaaagcgcggccttg
ctggcgcaggctcagcaggccgttgcccagggtgaggcgacccgcccgcaggagttgcat
atcgacgacgacgacccgtggctggagcagcgctgtagcgcgctgacgcagcagctgcgc
cagcacagcctgcagcagggcgagctgcagcagcagctgcacagcgacacccagcggcgc
cacagccagcagggctggctggccgagatagcccagcgcgaacgggcgtatcaggactgg
agctacctcaatcagctgatcggctccagcagcggcgacaagttccgcaagtttgctcag
gggctgacgctggaccatctggtctatctggccaaccgccagctgatgcgcctgcacgga
cgctaccagctgctgcgccgagagggcgacaccctggagctggaggtcgtcgatacctgg
caggcggatgcgcggcgcgatacccgcaccctctccggcggcgaaagtttcttggtcagc
ctgtccctggccttggcgctgtcggatctggtcagccacaagacccgcatcgactcgctg
tttctggatgagggatttggcacgctggatgccgagacgctggataccgcgctggacgcg
ctggataccctgaacgccagcggtaaaaccatcggcgtcatcagccacgtcgaggcgatg
aaggagcggatcccgctgcagatccgggtgaagaaaatcaacggactgggctttagccgc
ctcgacagtcgctatcgcgtcagcggcgacggggagtcataa
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integrated database retrieval system
