Edwardsiella tarda: ETAF_1006
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Entry
ETAF_1006 CDS
T02091
Symbol
sbcD
Name
(GenBank) Exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
etd
Edwardsiella tarda
Brite
KEGG Orthology (KO) [BR:
etd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
etd03400
]
ETAF_1006 (sbcD)
DNA repair and recombination proteins [BR:
etd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ETAF_1006 (sbcD)
Archaeal homologous recombinant proteins
ETAF_1006 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
ADM41125
UniProt:
A0A0H3DRE8
LinkDB
All DBs
Position
complement(1169666..1170898)
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AA seq
410 aa
AA seq
DB search
MRLIHTSDWHLGQHFYGKSRADEHRAFLDWLLLQAEQQQADAIIVAGDLFDTGTPPSYAR
ELYNRFVVALQGRGCQLIVLAGNHDSVATLNESRELLACLHTQVIAGAHADDAPLLLRRR
DGSPGAILCAVPFLRPRDLLQSRAGQSAAEKQLALQQAISDHYHALYQRALALQASLAQP
LPIVATGHLTTVGASGSESVRDIYIGTLDALPASAFPPADYIALGHIHRPQRVGHAEHIR
YSGSPIPLSFDELGSSKSVCLVTLAYGSAPQITQLPIPQTQPMRLLKGSLTEIGAAMEAL
RPLATDKPVWLDIEIDSDGWLSESERTLQQQAETLPVEILLLRRSREQRQRALTMQAGET
LSELTPDDVFSRRLALEQESDPQQQARAQRLFQQVLQEITLDPDTEETQA
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgatccatacctccgactggcaccttggccagcatttctacggtaaaagccgc
gccgatgaacaccgtgcgtttctcgactggctgctgctgcaggccgagcagcagcaggcc
gacgccatcatcgtggccggcgatctgttcgataccggaacgccgcccagctatgcccgt
gaactgtacaaccgctttgtggtggcgctacagggacgcggctgtcagctgatcgtcctg
gcgggtaaccacgactcggtggcgaccctcaacgaatcccgcgagctactggcctgcctg
catacccaggtgatcgcgggcgcccacgccgacgatgcgccgctgctgctgcggcgacgc
gacggcagccccggcgccatcctgtgcgccgttccctttctgcgaccgcgcgacctgctg
caaagccgcgccggccagtccgccgcggagaagcagctggcgctgcagcaggccatcagc
gatcactaccacgccctgtatcagcgtgcgctggcgctgcaggcctcgctagcgcagccg
ctgccgatcgtcgccaccggccacctgaccaccgtcggcgccagcggctccgaatcggtg
cgcgatatctatatcggcacgctggatgccctgccggccagcgcctttcccccggcagac
tatatcgccctggggcacattcaccgcccgcagcgggtcggtcacgcggagcatattcgc
tacagcggctccccgatccccctgagctttgacgagttgggcagcagcaaaagcgtctgc
ctggtgaccttagcgtacggcagcgcgccgcagataacccagctgcccatcccccagacc
cagccgatgcgcctgctcaagggctcgctgacggagattggcgcagccatggaggccctg
cgcccactggcgacggacaagccggtctggctggacatcgagatcgacagcgacggctgg
ctcagcgaaagcgaacgcacgctgcagcagcaggcggagacgctgccggtggagatcctg
ctgctgcggcgcagccgtgagcagcgtcagcgcgccctgaccatgcaggccggcgagacc
ctgagcgagctgacccccgacgacgtatttagccgacgcctggcgctggagcaggagagc
gatcctcagcagcaagcgcgggcgcagcggctgttccagcaggtgctgcaggagataacg
ctagaccccgataccgaggagacgcaggcatga
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