Edwardsiella tarda: ETAF_1692
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Entry
ETAF_1692 CDS
T02091
Name
(GenBank) Exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
etd
Edwardsiella tarda
Brite
KEGG Orthology (KO) [BR:
etd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
etd03016
]
ETAF_1692
Enzymes [BR:
etd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
ETAF_1692
Transfer RNA biogenesis [BR:
etd03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ETAF_1692
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
PilZ
Motif
Other DBs
NCBI-ProteinID:
ADM41800
UniProt:
A0A0H3DQZ5
LinkDB
All DBs
Position
1936571..1938559
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AA seq
662 aa
AA seq
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MVITIAHQPESLFHTMFQDNPLLAQLKQQLHSQTPRVEGVVKGTDKGFGFLEVDAQKSYF
IPPPQMKKVMHGDRVRAAVQVDKEREIAEPEELLEPFLTRFVGRIQKKENDERLSIIPDH
SLLKDAIGCRPARGLDRAFRQGDWVLAEMRRHPLKGDRSFFAEITAFITDGSDHFAPWWV
TLTRHDLARSAPQWQAGTLLEEGLAREDLCALPFVTIDSASTEDMDDALHVRENADGSLC
LTIAIADPTAYVSADSPLDAEARHRAFTTYLPGFNIPMLPRDLSDDLCSLREGQRRPVLA
CEVTLDADGSLRDDIRFFSGWIESKAKLVYDRVSDWLEGRGDWQPPSDDIAAQIRLLHRV
ANARTQWRQQHALVFRDRPDYRFVLDDHGDVTDIVAEPRRVANRIVEECMITANVCAALV
LRERLGFGIYNVHTGFDPALVEQAVSLLNANDVAANAEALLTLDGFCTLRRHLDSLPSTF
LDSRIRRFQTFAEISTEPGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKALIAGAPATRP
DPAMTLQLAERRRQNRMAERDVGDWLYARFLKDKVNAPTPFNAEIIDISRGGMRVRLLEN
GAVAFIPASFIHAVRDEMVCSQENGTLQVKGSVVYRQGDTVPVTLSEVRLDTRSLIARPF
SA
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
ttggtcatcacgatcgctcaccagccggaatcactatttcacactatgtttcaggacaac
ccgctgcttgcccagctaaaacagcaacttcactcgcagactccccgcgtggaaggcgtg
gtcaagggaaccgacaaaggctttggctttttagaggtcgacgcgcagaagagctatttc
attccgccgccgcagatgaagaaagtgatgcacggcgaccgcgtccgtgccgccgttcag
gttgataaagagcgcgaaatcgccgagccggaagagctgctggagcctttcctgacccgt
tttgtcgggcgtatccagaaaaaagagaacgacgaacgtctgtccatcatcccggatcac
tcgctgttgaaagacgccatcggctgtcgtccggcgcgcgggctggatcgcgccttccgg
cagggagactgggtgctggccgaaatgcgccgccatccgctgaagggcgaccgcagcttc
tttgccgagatcaccgccttcattaccgacggcagcgaccactttgccccctggtgggtc
accctgacccgccacgatctggcgcgcagcgcgccgcagtggcaggcgggaaccctgctg
gaagaggggctggcgcgtgaagatctgtgcgcgctgccgtttgtcaccatcgacagcgcc
agcaccgaagatatggatgatgcgctgcacgtgcgcgagaacgccgacggcagcctgtgc
ctgaccatcgctatcgccgatccgacggcctacgtcagcgccgacagtccgctggacgcc
gaggcgcgccatcgcgccttcaccacctatctcccgggctttaacatcccgatgctgccg
cgcgatctctctgacgacctgtgctcgctgcgcgaagggcagcgccgtccggtgctggcc
tgcgaggtcaccctcgacgccgacggcagcctgcgcgacgacatccgcttcttcagcggc
tggatcgagtccaaggcaaagctggtctacgatcgggtctccgactggctggagggccgc
ggcgactggcagccgccgagcgacgatatcgccgcccagatccgactgctgcaccgcgtg
gccaacgcccgcacccagtggcgtcaacagcatgccctggtgttccgcgatcgcccggac
taccgctttgttctcgacgatcacggcgacgttaccgatatcgtcgcggagccgcgccgg
gtggccaaccgcatcgtagaagagtgcatgatcaccgccaacgtctgcgcggcgctggtg
ctgcgcgaacgcctcgggtttgggatctacaacgtccataccggctttgatccggcgctg
gtggagcaggccgtctcactactgaacgccaacgacgtcgccgccaacgccgaggcgctg
ctgacgctggacggcttctgcaccctgcgccgccatctcgactcgctgccgagcaccttc
ttagatagccgtatccgccgcttccagacctttgccgaaatcagcaccgagccggggccg
cactttggcctggggctggaggcctacgccacctggacctcaccgatccgtaagtatggc
gatatggtcaaccaccgtctgctgaaggcgctgatcgccggagcaccagcgacgcggccg
gacccggcgatgacgctgcagctggccgagcgccgccgtcagaaccggatggcggagcgc
gacgtcggcgactggctgtacgcccgcttcctgaaggacaaggtcaacgccccgaccccg
ttcaacgccgagatcatcgatatctcgcgcggcggcatgcgcgtccgcctgctggagaac
ggcgcggtggcctttattccggcctccttcatccatgccgtgcgcgacgagatggtatgc
agccaggagaacggcacccttcaggtgaaaggcagcgtcgtctaccgccagggcgatacc
gttccggtgaccctgagcgaggtgcgcctcgatacccgcagcctgatcgctcgccccttc
agcgcctga
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