Edwardsiella tarda: ETAF_2049
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Entry
ETAF_2049 CDS
T02091
Name
(GenBank) Ribosomal protein S12p Asp88 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
etd
Edwardsiella tarda
Brite
KEGG Orthology (KO) [BR:
etd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
etd03009
]
ETAF_2049
Enzymes [BR:
etd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
ETAF_2049
Ribosome biogenesis [BR:
etd03009
]
Prokaryotic type
ribosomal protein modification factors
ETAF_2049
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
YajR_YAM
Methyltransf_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
ADM42155
UniProt:
A0A0H3DS06
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All DBs
Position
2337956..2339281
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AA seq
441 aa
AA seq
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MSNQSRQPTIGFVSLGCPKNLVDSERILTELRTEGYLVVPTYEDADLVIVNTCGFIDSAV
QESLEAIGEALHENGKVIVTGCLGAKENQIREVHPKVLEISGPHSYEQVLHHVHKYVAKP
QHNPFTSLVPEQGVKLTPKHFAYLKISEGCNHRCAFCIIPSLRGDLESRPIGAVLDEAKR
LADSGVRELLVISQDTSAYGADIQHRTGFWNGQPVKTSMLSLCEQLATLGIWIRLHYVYP
YPHVDDVIPLMAQGKLLPYLDIPLQHASPRILKLMKRPGAVERTLERIKRWREICPQLTL
RSTFIVGFPGETEEDFQMLLDFLREARLDRVGCFQYSPVESAAANELPDQVPDEIKQARF
DRFMQLQQQISAERLQEKVGLTLPVIIDEVDEEGAIGRSMADAPEIDGVVYLNGERGVKP
GDIVSVTIENADEYDMWGTLA
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatcaatcccgccaaccgacaatcggttttgtctccctcggctgcccaaaaaac
ctggtcgactccgaacgcatcctgaccgagctgcgcaccgaaggctacctggtggtacca
acctatgaagacgccgatctggtgatcgttaacacctgcggctttatcgacagcgcggta
caggagtctctggaggccatcggcgaggcgctgcatgagaatggaaaggtcatcgtgact
ggctgcctgggtgccaaagagaaccagatccgggaagtccaccccaaggtgctggagatc
tctgggccgcacagctatgagcaggtgctgcaccacgtacacaaatacgtggccaagccg
cagcacaaccctttcaccagcctagtgccggagcagggcgtcaagctaacgcccaagcat
ttcgcctatctgaaaatctccgaaggctgtaatcatcgctgcgcattctgcattatcccc
tctctgcgcggcgatctggaaagccggccaatcggcgctgtgctagacgaagccaagcgc
ctggccgactccggcgtccgggagctgctggtcatctcgcaggatacctctgcctacggc
gcagatatccagcatcgcaccggcttttggaacggtcagccggtcaaaaccagcatgctc
agcctgtgcgaacagctggcgacgctggggatctggatccgtctgcactatgtttacccc
tatccgcacgtggatgacgttatcccgctgatggcgcagggcaaactgctgccctatctg
gatattccgctgcagcacgccagcccgcgcattctgaagctgatgaagcgccccggcgcc
gttgagcgtaccctggagcggatcaaacgctggcgcgagatctgtccgcagctgaccctg
cgttcgacctttatcgtcggcttccccggcgagacggaagaggactttcagatgctgctg
gacttcctgcgcgaggcacgcctggatcgcgtcggctgcttccagtacagcccggttgaa
agcgccgccgccaacgaactgcccgaccaggtgccagacgagatcaagcaggcgcgcttc
gatcgctttatgcagctgcagcagcagatctccgcagagcgcctgcaggaaaaagtgggg
ctgacgctgccggtgatcatcgatgaggttgacgaggaaggcgccattggccgtagcatg
gccgatgcgccggagatcgacggcgtggtgtacctaaacggtgagcgtggggtcaaaccg
ggcgatatcgtcagcgttaccattgaaaacgccgacgaatacgatatgtggggcactctg
gcctga
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