Edwardsiella tarda: ETAF_2185
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Entry
ETAF_2185 CDS
T02091
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
etd
Edwardsiella tarda
Brite
KEGG Orthology (KO) [BR:
etd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
etd03016
]
ETAF_2185
Enzymes [BR:
etd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
ETAF_2185
Transfer RNA biogenesis [BR:
etd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ETAF_2185
Prokaryotic type
ETAF_2185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
WVELL
Motif
Other DBs
NCBI-ProteinID:
ADM42290
UniProt:
A0A0H3DSC5
LinkDB
All DBs
Position
complement(2492676..2493503)
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AA seq
275 aa
AA seq
DB search
MSQQPLTGQTSCPEYTLALGIEYDGSRYAGWQRQREVDSVQARLEAALSRVASEPVTVFC
AGRTDAGVHATGQVVHFTTHALRQEGAWTMGVNAHLPKDVAVRWVKSVSPDFHARFSATA
RRYRYVIYNHRYRPAVLQSGVTHCYLPLDAERMARAGQALLGENDFSAFRAAQCQSRTPW
RNVSHLRVNRYGPYVVVDIKANAFVHHMVRNIVGSLLEVGCGNQPESWIAELLAGRDRTL
AAATAKAAGLYLVAVDYPAQFALPQPPMGPLFLPD
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagcaaccgttgaccgggcagacatcgtgcccggaatatactctggcgctgggg
atcgagtatgacggcagccgctacgccggctggcagcgtcagcgggaggtcgacagcgtt
caggcgcgcctggaggcggcgctgtcgcgcgtcgccagcgagccggtgacggtgttctgc
gccgggcgtaccgacgccggcgtccacgctaccggtcaggtggtgcactttaccacccat
gccctgcgtcaagagggcgcctggaccatgggcgtcaacgcccatctccctaaggatgtc
gcggtacgctgggtcaagagcgttagccccgattttcacgcgcgctttagcgcgacggcg
cgccgctatcgctacgtcatctataatcatcgctatcgcccggcggtgctgcagagcggg
gtgacccattgctatctgccgctggacgctgagcgcatggcgcgcgccgggcaggcgctg
ctgggggagaatgacttcagcgcctttcgcgccgcccagtgtcagtcgcgaaccccgtgg
cgcaacgtctcccacctgagggtcaaccgctacggtccctacgtggtggtcgatattaag
gccaatgcctttgtgcaccatatggtgcgtaatatcgtcggcagcctgctggaggtgggg
tgtggcaatcagccggaaagctggatcgccgagctgctggcgggccgggatcgtaccctg
gccgctgcgaccgccaaggcggccgggctgtatctggtcgccgtggactacccggcccag
tttgccctgccgcagccgccgatggggccgctgtttctacccgattaa
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