Edwardsiella tarda: ETAF_2289
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Entry
ETAF_2289 CDS
T02091
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
etd
Edwardsiella tarda
Pathway
etd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
etd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ETAF_2289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
etd03400
]
ETAF_2289
DNA repair and recombination proteins [BR:
etd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ETAF_2289
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ETAF_2289
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_22
UB2H
SBDS_domain_II
HEM4
DUF87
Motif
Other DBs
NCBI-ProteinID:
ADM42392
UniProt:
A0A0H3DUR4
LinkDB
All DBs
Position
complement(2605398..2607416)
Genome browser
AA seq
672 aa
AA seq
DB search
MSKAFKLHSAFQPSGDQPEAIRRLEAGLEDGLAHQTLLGVTGSGKTFTIANVIADLNRPT
MVMAPNKTLAAQLYGEMKQFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTQGMLIDQRSILRRLSELQ
YARNDQAFARGTFRVRGEVIDIFPAEADDEALRVELFDDEVERLSLFDPLTGQLLRTVPR
FTVYPKTHYVTPRERILQAMEEIHAELATRRQSLLANNKLLEEQRLAQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEPPPTLFDYLPADGLLVIDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPLRFEEFEALAPQTIYVSATPGNYELEKSGDEVIDQVVRPTGLLD
PLIEVRPVATQVDDLLSEINQRAAIGERVLVTTLTKRMAEDLTEYLEEHGVRVRYLHSDI
DTVERMEIIRDLRLGEFDALVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNLNGKAILYADKMTPSMARAIGETERRRERQQAFNLAHGITPQALNKKVTDILQLG
DAPSRSRAKGTRGQRAAEPRTDYRDLSAKQIEQQIQRLETQMYQHAQNLEFEQAAALRDE
IHILREQFKNAP
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagccttcaaactgcattccgcctttcagccctccggcgatcagccagaggct
atccgccgtctggaagcggggttagaggatgggctggcgcatcagaccctgctgggggtg
accggctcgggcaagacgtttaccatcgccaacgtgatcgccgatcttaaccggccaacc
atggtgatggcgcccaacaagacgctggccgcccagctgtacggggagatgaagcagttc
ttcccggaaaatgcggtggagtactttgtctcctactacgactactatcagccggaagcc
tatgtgcccagctcggatacctttatcgaaaaggacgcgtcggtcaacgagcacattgaa
cagatgcgcctgtcggccaccaaggcgctgctggagcggcgcgacgtggtggtcgtcgcc
tcggtctccgcgatttacggcctgggcgatcccgatctgtacctgaagatgatgctgcac
ctgacccaggggatgctgatcgatcagcgcagcattctgcgccgcctctccgagctgcag
tatgcccggaacgatcaggcgtttgcgcgcgggacttttcgggtgcgcggcgaggtgatc
gacatcttcccggcggaggccgacgacgaggcgctgcgggtggagctgtttgatgacgag
gtggaacgcctgtcgctgttcgatcccctcaccgggcagctgctgcgcacggtgccgcgc
tttaccgtctacccaaagacccactatgtgaccccgcgcgaacgcatcctgcaggcgatg
gaggagatccacgccgagctggcgacgcgccgtcagtcgctgctggccaataacaagctg
ctggaagagcagcgtctggcccagcgcacccagttcgatctggagatgatgaacgagctg
ggctactgctcggggatcgaaaactactcccgctatctctccgggcgcgggcccggtgag
ccgccgccgaccctgtttgactacctgccagcggacggcctgctggtgatcgatgagtcc
catgtcaccatcccgcagatcggcggaatgtaccgcggcgaccgggcgcggaaagagacg
ctggtggagtatggctttcgcctgccgtcggcgctggataaccgcccgctgcgctttgag
gagttcgaggcgctggcgccgcagaccatctatgtgtcggcgaccccgggtaactacgag
ctggagaagtcgggcgacgaggtgatcgatcaggtggtgcgcccgacggggctgctcgat
ccgctgatcgaggtgcgcccggtggcgacccaggtggacgacctgctgtcggagatcaat
cagcgcgccgccatcggcgagcgggtgttggtgaccaccctgaccaagcggatggccgaa
gatttgaccgagtatctggaggagcacggcgtgcgcgtgcgctatctgcactccgatatc
gacaccgtcgagcgcatggagatcatccgcgatctgcgcctgggcgagtttgacgcgctg
gtggggatcaacctgctgcgcgaggggctggatatgccggaggtgtcgctggtggcgatt
ctggacgcggacaaggagggcttcctgcgctcggagcgttcgctgattcagaccatcggc
cgagcggcgcgtaacctgaacggcaaggcgatcctctatgccgacaaaatgaccccgtcg
atggcgcgggcgatcggagagacagagcgccgccgcgagcgccagcaggcctttaacctg
gcgcacggcatcacgccgcaggcgctgaacaagaaggtcacggatatcctgcagctgggc
gacgcgccgtcgcgcagccgggccaaagggacgcgcggacagcgtgcggcagagccgcgt
acggactaccgcgatctgtcggcgaagcagatcgagcagcagatccagcgtctggagacg
cagatgtaccagcatgctcagaacctggagtttgagcaggccgccgcgctgcgcgacgag
atccacattctgcgcgagcagtttaagaatgcgccctag
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integrated database retrieval system
