Edwardsiella tarda: ETAF_2658
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Entry
ETAF_2658 CDS
T02091
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
etd
Edwardsiella tarda
Pathway
etd03410
Base excision repair
etd03430
Mismatch repair
etd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
etd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ETAF_2658 (recJ)
03430 Mismatch repair
ETAF_2658 (recJ)
03440 Homologous recombination
ETAF_2658 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
etd03400
]
ETAF_2658 (recJ)
DNA repair and recombination proteins [BR:
etd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ETAF_2658 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ETAF_2658 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ETAF_2658 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
ADM42761
UniProt:
A0A0H3DTD2
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All DBs
Position
complement(3033343..3035076)
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AA seq
577 aa
AA seq
DB search
MTIKTRLCRREAAAECQLPDEIPPLLRRLYGNRGVRSAAELERGVKGLLSYQQLNGIERA
VTLLQEALAQRLRLVIVGDFDADGATSTALSVLALRAMGCDSVQYLVPNRFEDGYGLSPE
VVEQAAAMGAELIMTVDNGVSSHAGVEAAHARGIRVLVTDHHLPGETLPAAEAIVNPNLA
DCDFPSKSLAGVGVAFYLMLALRRHLVEQGWFEQLGRPAPNLADLLDLVALGTVADVVAL
DTNNRILVHQGLSRIRAGRCRPGIRALLEVAKRDALRLTASDLGFALGPRLNAAGRLDDM
SLGVALLLSDDMPQARALACDLDTLNQTRREIEQGMQSEALAICAGLERTLTQLPYGLAL
YHPEWHQGVVGILASRIKERFYRPVIAFAPAGEGLLKGSGRSLPGLHMRDALERLDTQHP
GLMQKFGGHAMAAGLTIEATRFDDFRHHFDELVGEWLDPAQLEGVVWSDGALSSDELTLP
VAELLRDGGPWGQAFPEPTFDGQFRILQQRLVGERHLKLMLEPLGGGPLLDGIAFNVDTA
LWPDASVREVELAYRLDINEYRGNRSVQLMIQHLWPR
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
ttgacgattaagacacggctttgccggcgagaggcggcggcggagtgtcagctgccggac
gagataccgccgctgctgcgccgtctgtacggcaaccgcggcgtgcgcagcgccgccgag
ctggagcgcggagtgaaggggctgctgtcatatcagcagctgaacggtattgagcgggcg
gtgacgctgctgcaggaggcgctggcgcagcgtctgcgactggtgatcgtcggtgatttt
gatgcggacggcgcgaccagcaccgcgctgtcggtgctggcgctgcgcgccatgggctgc
gatagcgtgcagtatctggtgcccaaccgttttgaggatggctatggcctgagcccagag
gtggtcgaacaggccgccgccatgggggcggagctgatcatgacggtggataacggcgtg
tcgtcgcacgccggggtcgaggcggcccacgcgcgcgggatccgcgtgctggtgaccgat
caccatctgccgggagagacgctgccggcggcggaggctatcgtcaacccgaatctggcc
gactgcgattttccctccaagtcgctggccggcgtcggcgtcgccttctatctgatgctg
gcgctgcgccgtcacctggtcgagcagggctggtttgagcaactggggcgccctgcgccc
aatctggccgatctgctggatctggtggcgctgggcaccgtggcggacgtggtcgcgctg
gataccaacaaccgtatcctggtgcaccaggggctgagccgtattcgcgccgggcgctgt
cgtccggggatccgcgcgctgctggaggtggccaagcgcgacgccctgcgcctgaccgcc
agcgatctcggctttgccctggggccgcgcctcaacgccgccgggcggctggacgatatg
tcgctgggggtggcgctgctgctgagcgacgatatgccgcaggcgcgtgcgctggcctgc
gatctggatacgctaaaccagacgcgccgcgagatagagcaggggatgcagagcgaggcg
ctggcgatctgcgccgggctggagcgtaccctgacgcagctgccctatgggctggcgctc
taccatcccgaatggcatcagggcgtcgtggggatcctggcttcgcgcatcaaagagcgc
ttttaccgtccggtgatcgcctttgctccggccggagaggggctgctaaagggatcgggg
cgctcgctgccagggctgcacatgcgcgatgcgctagagcgcctggacacccagcacccg
gggctgatgcagaaatttggcggccatgcgatggcggcggggctgaccattgaggcgacg
cgctttgacgacttccgtcatcactttgatgaattggtgggcgaatggctcgatccggcc
cagctggaaggggtagtgtggtcggacggggcgctgagcagcgatgagctgacgctgccg
gtggcggagctgctgcgcgacggtgggccctggggacaggcgtttccggagccgaccttt
gacggtcagtttcgcattctgcagcagcgcctggtcggggagcgccaccttaagctgatg
ctggagccgctgggcggcggcccgctgctggacggcattgcgtttaatgtggataccgcc
ctgtggccggacgccagcgtgcgtgaggtggagctggcctatcggctggacatcaatgag
taccgtggcaatcgcagtgtacagttaatgatccaacacctctggccgcgctga
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