Edwardsiella tarda: ETAF_3172
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Entry
ETAF_3172 CDS
T02091
Name
(GenBank) Ribose operon repressor
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
etd
Edwardsiella tarda
Brite
KEGG Orthology (KO) [BR:
etd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
etd03000
]
ETAF_3172
Transcription factors [BR:
etd03000
]
Prokaryotic type
Helix-turn-helix
LacI family
ETAF_3172
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_Tnp_ISL3
HTH_3
HTH_38
HTH_31
MerR
PF0610-like_N
Motif
Other DBs
NCBI-ProteinID:
ADM43275
UniProt:
A0A0H3DX84
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All DBs
Position
complement(3639037..3640044)
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AA seq
335 aa
AA seq
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MATMKDVARLAGVSTSTVSHVINNNRFVSDSVRQRVLEAVQQLNYAPSALARSLKMNQTH
TLGMLVTTSNNPFFAEVVRGVERSCYERGYSLILCNTEGDPARMSQSMETLLQKRVDGLL
MMCTENFRPAQEMIARYPALPTVMMDWALFDGQNDIIQDNSFLGGQIATRHLIERGYTRI
ACLAGPKDKSPSRQRLEGFLYEMKQAALPVPPEYILFGDFEFAGGVQAMKQLLALPTPPH
ALFTGNDAMAVGVYQVLFEAGLRVGDDVAVVGYDDIELARYMSPPLTTIHQPKDELGELA
VDTLVHRLKHPTREPQTLVLTPQLIERGSVAVHHG
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaccatgaaggatgtcgcccgcctcgcgggcgtctccacctcgaccgtatcccat
gtcatcaataacaatcgcttcgtcagcgacagcgtgcgtcagcgtgttctggaggccgtt
cagcagctgaattatgccccctctgcgctggcccgcagcttaaagatgaaccagacgcac
acgctcgggatgctggtgaccaccagtaataaccccttttttgctgaggtggtgcgcggg
gtggagcgcagttgctatgagcggggctatagcctgatcctgtgtaacaccgagggtgat
ccggcgcgcatgagccagagtatggagacgctgctgcaaaagcgggtagacggtctgctg
atgatgtgcaccgagaattttcggccggcgcaggagatgattgcccgttatcccgcgctg
ccgacggtgatgatggactgggcgctgttcgatggtcagaacgatatcatccaggacaac
tccttcctgggggggcaaatcgcgactcgtcatctgatcgaacgcggctatacccgcata
gcctgtctggctggccctaaggataagtccccctctcgccagcgtcttgagggctttctg
tatgaaatgaaacaggccgcgctgccggtaccgccggagtacatcctgttcggcgatttc
gagtttgccggcggagtgcaggcgatgaaacagctgctggcgctaccgacgccgccccat
gcgctgtttaccggcaatgacgcgatggccgtcggcgtatatcaggtgttgtttgaagcc
ggactgcgggtgggcgacgatgtcgcggtcgtcggctatgacgatattgagctggcgcgc
tatatgtcgccgccgttgacgacgatccatcagcccaaggatgagctgggcgagctggcc
gtcgatacgctggtacaccgcctgaagcatcctacgcgggagccacagacgctggtctta
acgccccagcttatcgagcgaggttcggtcgcggtccatcacggctga
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