Edwardsiella anguillarum: ETEE_0885
Help
Entry
ETEE_0885 CDS
T03245
Name
(GenBank) ATP-dependent RNA helicase SrmB, putative
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
ete
Edwardsiella anguillarum
Brite
KEGG Orthology (KO) [BR:
ete00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ete03009
]
ETEE_0885
Enzymes [BR:
ete01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ETEE_0885
Ribosome biogenesis [BR:
ete03009
]
Prokaryotic type
rRNA helicases
ETEE_0885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
AIJ07354
UniProt:
A0A076LNV3
LinkDB
All DBs
Position
835883..837229
Genome browser
AA seq
448 aa
AA seq
DB search
MTATNFSELELDERLLDALRDKGYERPTAIQIAAIPPAMDGRDVLGSAPTGTGKTAAFLL
PALQHLLDFPRKKSGPPRVLILTPTRELAMQVADQARELARHTSLDITTITGGVSYINHA
EIFNTNQDLVVATPGRLLQYIKEENFDCRAVETLILDEADRMLDMGFASDIETVSAETRW
RRQTLLFSATLESDAVHDFADRLLNDPVDVSAEPPRRERKKIQQWYYRADSLKHKTALLC
NLLRQPDVTKSVIFVRKRERVHELVTWLHQAGIQACFLEGEMVQAKRNEAIKRMLDGRVN
VLVATDVAARGLDIPDISHVFNFDMPRSADVYLHRIGRTARAGRKGTAISLIEAHDQLLL
GKVSRYVQEPLKSRVVDDLRPETKAPSLKNKGKPSKKVQAKRAQKKLDEQKKKVKTKVRH
RDSKNVGKRRQPNAQSNPATAGAEDSGK
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgacagcaaccaacttttccgaactcgaactcgacgagcgcctgctcgacgccctgcgc
gacaaaggctatgagcgcccgaccgccatccagatcgccgccatcccgcccgccatggac
ggacgggacgttttgggttccgcaccaacgggaaccggcaagaccgccgccttcctgctg
cccgcgctgcagcacctgctcgacttcccgcgtaagaagtccggcccgccgcgcgttctg
atcctgacgccgacccgcgaacttgccatgcaggtggccgatcaggcccgggagctggca
cgccacaccagcctggacatcaccaccatcaccggcggcgtttcctatattaaccacgcc
gagatctttaacaccaaccaggatctggtggtcgccacgccggggcgtctgttgcagtat
atcaaagaagagaactttgactgccgggcggtagagaccctgatcctcgatgaagctgac
cgcatgctggacatgggctttgccagcgacatcgaaaccgtctccgccgaaacccgctgg
cgtcggcagaccctgctgttctccgctaccctggagtccgacgcggttcacgactttgcc
gatcgcctgctcaacgatcccgttgacgtcagcgccgagccgccgcgccgtgaacgtaag
aagatccagcagtggtactatcgcgccgatagcctgaaacacaagaccgccctgctgtgt
aatctgctgcgccagccggacgtcaccaagtccgttatctttgtgcgcaagcgtgagcgc
gtgcatgagctggtcacctggctgcatcaggccggtatccaggcctgtttcttagaaggc
gaaatggtgcaggccaagcgtaacgaggccattaagcgcatgctggacggacgggtcaac
gtactggtcgccaccgacgtcgccgcccgcggcctggatattccggatatcagccacgtg
ttcaactttgacatgccgcgcagcgccgatgtctacctgcaccgcatcgggcgtaccgcc
cgcgccgggcgtaagggcaccgccatctccctgatcgaggcgcacgaccagctgctgctc
ggcaaggtgagccgctatgtgcaggagccgttgaagtcacgcgtcgtcgatgatctacgc
ccggaaaccaaggcgccgagcctgaaaaacaagggtaagccgtcgaagaaggtgcaggcc
aagcgggcgcagaaaaagctcgacgagcagaagaaaaaggtcaagaccaaagtgcgccac
cgcgacagtaaaaacgtcggcaagcgccgccagcccaacgcccagagcaatcccgccacc
gcgggcgccgaggatagcggcaaataa
DBGET
integrated database retrieval system
