Edwardsiella anguillarum: ETEE_1858
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Entry
ETEE_1858 CDS
T03245
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
ete
Edwardsiella anguillarum
Pathway
ete03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ete00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ETEE_1858 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ete03019
]
ETEE_1858 (rhlB)
Enzymes [BR:
ete01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ETEE_1858 (rhlB)
Messenger RNA biogenesis [BR:
ete03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ETEE_1858 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_22
CCDC138_C
Motif
Other DBs
NCBI-ProteinID:
AIJ08305
UniProt:
A0A076LID3
LinkDB
All DBs
Position
complement(1849028..1850302)
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AA seq
424 aa
AA seq
DB search
MTEQKFADFALHPMVIKALESKGFHSCTPIQALALPLAIAGRDVAGQAQTGTGKTLAFLA
STFHYLLTHPAIAERKTNQPRALIMAPTRELAVQIHSDAEPLAQETGLRLGLAYGGDGYD
KQLRVLEQGVDILIGTTGRLIDYAKQGHVDLGAIQVVVLDEADRMFDLGFIKDIRWLFRR
MPPTAQRLNMLFSATLSYRVRELAFEHMNNAEYVEVEPEQKTGHRIQEELFYPSNEEKMR
LLQTLLEEEWPDRCIIFANTKHRCEDIWGHLAADGHRVGLLTGDVPQKKRLRILEDFTKG
HIDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGNSISLACEEYV
LNLPAIESYIGHSIPVSKYNGDALLKDLPAPKRLSRSRNGAGARRPGSPRRGSGAPRPNR
KRSG
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
ttgactgaacagaagtttgccgacttcgccctgcacccaatggtgataaaagcccttgaa
tcaaaagggtttcacagctgcactcccattcaggcactggcattgcccctggcgatcgcc
gggcgtgacgttgcgggacaggcgcaaaccggcaccggcaagacgctagcatttttagcg
tctacttttcattatctactgactcatccggccattgccgagcgcaaaaccaatcagccg
cgcgcgctgattatggcgccgacacgtgagctggccgtccagatccactccgatgccgag
cctctggcccaagaaaccggcctgcgcctgggcctggcctacggcggcgatggctatgac
aagcagctccgggtcttagagcagggtgttgatattctgatcggtaccaccggacgcctg
atcgactatgccaagcagggtcacgttgacctcggcgccattcaggtcgtggtactcgac
gaagccgatcgcatgttcgatctgggctttatcaaagacattcgctggctgttccgccgt
atgccgccgaccgcccagcgtctcaacatgctgttttccgccaccctctcttatcgcgtg
cgtgaactggcgttcgagcatatgaacaacgccgagtatgtcgaggttgagccggagcaa
aaaaccggacaccggatccaggaagagctgttctacccctccaacgaagagaaaatgcgc
ctgctgcagacgctgctggaagaggagtggccggatcgctgcatcattttcgccaacacc
aagcaccgctgcgaggacatctgggggcacctggccgccgatggccaccgcgtcggtctg
ctgaccggggacgtaccgcagaaaaaacgcctgcgcatcctggaagatttcaccaagggg
cacatcgatattctggtcgccaccgacgtcgccgcgcgcggcctgcatatcccggcggtc
acccatgtgtttaactatgacctgcccgacgactgtgaagactacgtacaccgcatcggc
cgtaccggtcgtgccggcgccagcggcaactccatcagcctcgcctgtgaagagtatgtg
ctgaacctgccggctatcgaaagctatatcggccattcgattccggtcagcaaatacaac
ggcgatgccctgctcaaggatctgccggcccccaaacgcctgagccgtagccgtaacggc
gccggcgcacgccgtccgggatcgccgcgccgcggcagcggcgcaccgcgccctaaccgt
aaacgctcaggttaa
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