Edwardsiella anguillarum: ETEE_1860
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Entry
ETEE_1860 CDS
T03245
Symbol
rho
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ete
Edwardsiella anguillarum
Pathway
ete03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ete00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ETEE_1860 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ete03021
]
ETEE_1860 (rho)
03019 Messenger RNA biogenesis [BR:
ete03019
]
ETEE_1860 (rho)
Transcription machinery [BR:
ete03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ETEE_1860 (rho)
Messenger RNA biogenesis [BR:
ete03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ETEE_1860 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA_25
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
AIJ08307
UniProt:
A0A076LNK9
LinkDB
All DBs
Position
1851224..1852483
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGESMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDKPENARSKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTTPEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDEFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaatacgccggtttctgagttgattacgcttggcgagagc
atggggctggaaaatctggcgcgcatgcgtaagcaggatattatttttgccatccttaag
cagcatgcgaaaagcggcgaagatatttttggcgatggcgtgctagagatcctgcaggac
ggttttggattcctgcgctccgcagacagctcctaccttgccggtcccgatgatatctac
gtttctcccagccaaatccgccgttttaacctgcgtaccggtgataccatttccggcaaa
attcgtccgccgaaagagggtgagcgctactttgccctgctgaaggttaacgaagttaac
tatgacaagccggaaaatgcccgcagcaagatcctgtttgaaaacctgacgccgctgcat
gccaattcgcgtctgcgcatggagcgtggcaacggttctacggaagacttgaccgcgcgc
gtgctggatctggcctcgccgattggccgcggtcaacgcggtctgatcgtcgctccgccg
aaggccggtaagacgatgctgctgcagaacatcgcccagagcatcgcctataaccatcct
gactgcgtgctgatggtgctgctgatcgatgagcgtccggaagaggtgacggagatgcag
cgtctggtgaagggtgaggtggttgcctcgacctttgatgagccggcgtcgcgccatgtt
caggtcgctgaaatggtgatcgaaaaggccaagcgtctggttgaacacaagaaagacgtg
atcatcctgctggactccatcacccgtctggctcgcgcctataacaccgtggtgccggcc
tccggtaaagtgttgaccggcggcgtggacgccaacgccctgcaccgtccgaagcgcttc
ttcggcgcggcgcgtaacgtggaggagggcggcagcctgaccatcatcgcgacggcgctg
atcgataccggctctaagatggatgaggttatctacgaagagtttaagggcaccggtaac
atggagctgcatctgtcgcgtaagattgctgagaagcgcgtcttccccgccatcgattac
aaccgctccggtacccgtaaagaagagctgctcaccacgccggaggagctgcagaagatg
tggatcctgcgcaagattattcacccgatgggtgagatcgatgcgatggagttcctgatc
aataagttggcaatgaccaaaactaacgatgagttctttgacatgatgaaacgctcttaa
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