Edwardsiella anguillarum: ETEE_2459
Help
Entry
ETEE_2459 CDS
T03245
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
ete
Edwardsiella anguillarum
Brite
KEGG Orthology (KO) [BR:
ete00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ete03016
]
ETEE_2459
Enzymes [BR:
ete01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
ETEE_2459
Transfer RNA biogenesis [BR:
ete03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
ETEE_2459
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AIJ08900
UniProt:
A0A076LK45
LinkDB
All DBs
Position
complement(2497101..2497631)
Genome browser
AA seq
176 aa
AA seq
DB search
MQQRLFFAIPLPPPLQQTLIQWRAEHFSSQAGRPIAATNLHLTLAFLGDVGSAQQQRLQT
LAGRIHQAPFSLTLDDAGQWPRPGVVWLGMRRAPRGLIQLADLLRSQAARSGCYQSPHPF
HPHVTLLRHAYQAIAIPAATFRWTFDVTHFSLFSSQQAQGRTRYQPLASWPLRRDD
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaacgccttttttttgccattccgctaccgccgccgctgcagcaaacgctgatc
cagtggcgagccgagcacttctcttcccaggcgggacgaccgatcgccgccaccaacctg
catctgacgctggcttttcttggcgacgtcggcagcgcacagcagcagcgtctgcagacg
ctagccgggcgtatccatcaggcgccctttagcctgacgctagatgacgccggccagtgg
ccacgccccggcgtggtctggctgggtatgcgacgggcgccgcgcgggctgatccagctg
gcagatctgctccgctcacaggcggcgcgcagcggctgctaccagagcccgcaccccttt
catccccatgttacgctgctgcgccacgcctatcaggcgatcgcgatccccgcggcgacc
tttcgttggacgttcgacgtcacccatttttccctgttcagctcgcagcaggctcaggga
cgcacccgctatcaaccgctggccagctggcccctgcggcgcgatgactaa
DBGET
integrated database retrieval system
