KEGG   Echinops telfairi (small Madagascar hedgehog): 101638197
Entry
101638197         CDS       T08707                                 
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
etf  Echinops telfairi (small Madagascar hedgehog)
Pathway
etf03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:etf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    101638197 (TAF5L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:etf03021]
    101638197 (TAF5L)
   03036 Chromosome and associated proteins [BR:etf03036]
    101638197 (TAF5L)
Transcription machinery [BR:etf03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     101638197 (TAF5L)
   Coactivators
    SAGA/TFTC/STAGA complex
     101638197 (TAF5L)
Chromosome and associated proteins [BR:etf03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     101638197 (TAF5L)
    STAGA complex
     101638197 (TAF5L)
    TFTC complex
     101638197 (TAF5L)
    SAGA complex
     101638197 (TAF5L)
    SLIK complex
     101638197 (TAF5L)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd TFIID_NTD2 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_Aladin Beta-prop_SCAP Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_WDR41 Beta-prop_IFT140_1st Beta-prop_RIG_2nd NBCH_WD40 Tricorn_2nd Beta-prop_DCAF4 RMC1_N Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_Nup120_160 Beta-prop_WDR19_1st Beta-prop_EIPR1 WD40_RFWD3 PEP5_VPS11_N Beta-prop_IP5PC_F PROPPIN eIF2A Ge1_WD40 WD_LRWD1 Beta-prop_NWD2_C Mala_s_1-like Nbas_N Beta-prop_DCAF12 Beta-prop_ACSF4 vATP-synt_AC39
Other DBs
NCBI-GeneID: 101638197
NCBI-ProteinID: XP_004712222
UniProt: A0ABM0J0N3
LinkDB
Position
Unknown
AA seq 589 aa
MKRVRTEQIQMAVSGYLKRRQYMDSEGPLKQGLRLSQTAEEMAANLTVQSESGCANIVSA
APCQAEPQQYEVQFGRLRSFLTDSDSQHSHEVMPLLYPLFVYLHLSLVQNSPKSTVESFY
SRFHGMFLQNASQKDVIEQLQTTQTIQDILSNFTLRAFLDNKYVVRLPEDSYNYLIRYLQ
SDNNTALCKVLSLHIHLDVQPTKRTDYQLYASGSSSRSESSGLEPTDMPTPILQNEAALE
VLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISPESKLLAAGFDNSCIKLWSLRSK
KLKSEPHQVDVSRIHLACDILEEEDDEDDSAGTEMKILRGHCGPVYRTRFLSDSSGLLSC
SEDMSIRYWDLGNFTNTVLYQGHAYPVWDLDISPYGLYFASGSHDRTARLWSFDRTYPLR
IYAGHLADVDCVRFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNG
KYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIR
NTYCSTSADGSSSELVGVYTGQMSNVLSVQFMACNLLLVTGITQENQEH
NT seq 1770 nt   +upstreamnt  +downstreamnt
atgaaacgagtacgtacagagcagattcagatggcagtgtccggctacctcaaacgccga
caatacatggattcagaaggtcccctaaaacaaggattgcgactgtcacagactgctgaa
gagatggcagctaatctcacagtccagtcagaatctggttgtgccaacatcgtgtctgca
gccccctgccaggcagagccccagcaatatgaagtacagtttggacgactacggagtttt
ctcactgattctgattcccagcacagccacgaagtgatgcctctcctctatcctctcttt
gtctacctccatctcagcctggtccagaacagtccgaagagcacagtggaaagtttttac
agccgcttccatggaatgtttttacagaacgctagccagaaggatgtcattgagcagcta
cagaccactcagaccatccaggacatcctgtctaacttcacgctgcgagcatttctagat
aacaagtatgtagtccgtctcccagaagacagctacaattaccttatccgctacctccaa
agtgacaacaatactgccctgtgcaaagtcctctccttacatattcatctggatgtgcag
cctaccaagagaacagactaccagctctatgccagtggcagctcctcacgtagcgagagc
agtggcttagagcccaccgacatgcccacccctattctgcaaaatgaagctgccttggag
gtcttgcaagagagcattaagcgagtcaaggatgggcctccttcactcaccaccatctgt
ttctatgccttctataacacagagcagctactgaacactgcagaaatttccccagagagt
aagctgcttgctgctgggtttgacaactcctgtataaaactttggagtttacggtccaag
aagttaaagtctgaaccccaccaagtggatgtgtctcgtatccacttggcttgtgatatt
cttgaagaagaggatgatgaggatgatagcgcaggcacagaaatgaagatactccgagga
cattgtgggcctgtgtacagaacaaggttcctatcggacagctcagggttgctctcttgt
tctgaagacatgtccattcgatattgggaccttggaaatttcaccaacactgtgttgtac
caaggacacgcgtaccctgtgtgggacctggacattagcccctatggtctgtacttcgcc
agtggttcacatgaccgtaccgcaagactgtggtcatttgaccggacttacccactgaga
atatatgcagggcacctggcagatgtagactgtgtcagattccaccccaattctaactac
ttagccactggctcaactgataagacggtccggctgtggagtactcagcaggggaattct
gtgaggctcttcacaggccaccgagggcctgtgctttctcttgcattttctcctaatggt
aagtacttggcatcggctggtgaggaccagaggttgaagctgtgggacttggcttccgga
actctttataaagagttgagaggccacacagacaacatcactagccttacatttagccca
gacagcagcctgattgcctctgcctccatggacaactccgttcgtgtttgggacatcagg
aacacttactgcagtacttctgctgatggctcctccagtgaacttgtgggcgtgtacacc
gggcagatgagtaatgtgctgagtgtacagtttatggcctgtaaccttcttttagtgacg
gggattacacaagaaaatcaggaacattaa

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