KEGG   Echinops telfairi (small Madagascar hedgehog): 101638280
Entry
101638280         CDS       T08707                                 
Symbol
THOC6
Name
(RefSeq) THO complex subunit 6 homolog
  KO
K13175  THO complex subunit 6
Organism
etf  Echinops telfairi (small Madagascar hedgehog)
Pathway
etf03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:etf00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    101638280 (THOC6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:etf03019]
    101638280 (THOC6)
   03041 Spliceosome [BR:etf03041]
    101638280 (THOC6)
Messenger RNA biogenesis [BR:etf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     101638280 (THOC6)
Spliceosome [BR:etf03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    101638280 (THOC6)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 WDR55 WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 NBCH_WD40 EIF3I Beta-prop_IP5PC_F WDR54 WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_LRRK2 Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_SCAP
Other DBs
NCBI-GeneID: 101638280
NCBI-ProteinID: XP_004705878
LinkDB
Position
Unknown
AA seq 341 aa
MERTLPHAVPLSQMEVFQALQRLHMTVFSQSVSPCGKFLAAGNNYGQIAIFSLSAALSSE
AKEESKKPVVTFQAHDGPVYTMVSTDRQLLSAGDGEVKAWLWAEILKKGSKELWRRQPPY
RTSLEVPEINALLLVPKENSLILAGGDCQLHTMDLETRAFTRTLRGHTDYVHCLALRERS
PEVLSGGEDGTVRLWDLRVAKEVQIIEVYKHEECSRPQNGRWIGCLATDSDWMVCGGGPA
LTLWHLRSSTPTTIFPMRAPQKQVTFYQDLILSAGQGPCINQWQLSGELKAQVPGSSPGL
LSLSLNQQPAAPECKVLTAAGNSSRVDVFTNLGYRAFSLSF
NT seq 1026 nt   +upstreamnt  +downstreamnt
atggagcgaacattgccacacgcggttcctttgagtcagatggaggtgttccaggcctta
cagcggctgcacatgacagtcttctctcagagcgtgtccccctgcggcaagttcctggca
gctggcaacaattacgggcagattgccatcttcagcctgtccgcagctctgagttcggaa
gctaaagaggagagtaagaagcccgtggtgactttccaagcccatgatgggcccgtctac
accatggtgtccaccgatcggcagctgctcagtgctggggacggggaggtgaaggcctgg
ctgtgggcagagatcctcaagaagggtagcaaggagctctggaggcgtcagccaccatac
aggaccagcctggaagtgcccgaaatcaatgctttgctgctagtccccaaggagaattcc
ctcatcctggccgggggagactgtcaactgcataccatggacttggaaaccagggccttt
acacggaccctccggggtcacacagactacgtccattgcctggcgctgagggagcgaagc
cccgaggttctgtcggggggagaagacgggaccgtgaggctttgggatctccgcgtggct
aaggaggtacagataatcgaggtctacaagcacgaggagtgctccaggccccaaaatggt
cgctggattgggtgcttggccactgattcggactggatggtctgtggagggggcccggcc
ctgaccctttggcacctgcggtcctccacgcccaccaccatcttccccatgagggcgcca
cagaagcaggtcaccttctaccaggacctgattctgtcggccggtcagggcccctgcatc
aaccagtggcagctaagtggggaactcaaggcccaggtgccaggctcttccccagggctc
ctcagcctgagcctcaatcagcagccggcggcccccgagtgcaaggtcctgacagctgca
ggcaacagcagccgtgtcgatgttttcaccaacctgggctaccgtgccttctccttgtcc
ttctga

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