Echinops telfairi (small Madagascar hedgehog): 101638408
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Entry
101638408 CDS
T08707
Symbol
NUP188
Name
(RefSeq) nucleoporin NUP188
KO
K14311
nuclear pore complex protein Nup188
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf03013
Nucleocytoplasmic transport
etf05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101638408 (NUP188)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101638408 (NUP188)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etf03019
]
101638408 (NUP188)
Messenger RNA biogenesis [BR:
etf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101638408 (NUP188)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Nup188_SH3-like
TRS130_4HB
Motif
Other DBs
NCBI-GeneID:
101638408
NCBI-ProteinID:
XP_045144504
LinkDB
All DBs
Position
Unknown
AA seq
1559 aa
AA seq
DB search
MTERQVSRWFVQCLREQSMLLEIIFLYYAYFEMVPSDLLVLTKMFKEQGFGGRQTNRHLV
DETMDHFVDRIGYFSALILVEGMDIESLHKCALDDRRELHQFAQDGLICQDMDHLVLTFG
DISHHAPVLLSWALLRHTLSPEETSTLVRKIGGTAIQLNAFQYLTQLLQSLASGGNDCTT
STACMCIYGLLSFVLTSLELHTLGNQQDIIDTACEVLADPSLPELFWGTEPTSGLGIILD
SVCGMFPHLLSPLLQLLRALVSGKSTAKKVYSFLDKMSFYNELYKHKPHDVISHEDGTLW
RRQSPRLLYPLGGQTNLRIPQGTVGQVMLDDRAYLVRWEYSYSSWTLFTCEIEMLLHVVS
TADVIQHCQRVKPIIDLVHKVISTDLSIADCLLPITSRIYMLLQRLTTVISPPVDVIASC
VNCLTVLAARNPAKVWTDLRHTGFLPFVAHPVSNMSQMISAEGMNAGGYGSLLMNSEQPQ
GEYGVTIAFLRLVTTLVKGQLGSTQSQGLVPCVMFVLKEMLPSYHKWRYNSHGVREQIGC
LILELIHAILNLCHETDLHSSDTPSLQYLCVCSLAYTEAGQTVINIMGIGVDTIDMVMAA
HPRSDGAEGQGQGQLLIKTVKLAFSITNNVIRLKAPSNVASPLEQALTQHNGAHGNNLIA
VLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGSDAAAIRDAFLIRLQSKIEDMR
IKVMVLEFLTVAVETQPGLTELFLNLEVKDGSDGSKEFSLGVWSCLHAVLELIDSQQQDR
YWCPPLLHRAAIAFLHALWQDRRDSAMLVLRTKPKFWENLTSPLFGTLSPPSETSEPSIL
ETCALIMKILCLEIYYVVKGSLDQSLKDRLKKFSSEKRFAYWSGFVKSLAVHMAETEGNS
CTSLVEYQMLVSAWRMLLIIATSHVDIMHLTDSAVRRQLFLDVLDGTKALLLVPTSVHCL
RLGSMMCTLLLILLRQWKRELGSVDDILGPLTEILEGVLQADQQLMEKTKAKVFSAFITV
LQMKEMRVGDIPQYSQLVFSVCETLQEEVIALLDQTRHSLASGTTPEDKDSMETDDCSRP
RHKDQRDGQVCVLGLHLAKELCEVDEDGDSWLQVTRRLPILPTLLTALEVSLRIKQNLHF
TEASLHLLLTLARTQQGATAVAGAGITQSICLPLLSVYQLSSNGTVQTPSTYRKSLDAPS
WPGVYRLSMSLMERLLKTLRYNFLTEALDFVGVHQERTLQCLNAVRTVQSLACLEEADHT
VGFILQLSNFVKEWHFHLPQLMQDVQVNLCYLCQACTSLLHSRKMLQHCLQNKNGDAMPS
AVGPRGQRPPTAAPAAPSCSASKQQTADTEAAQQRALHTVQYGLLKILSRTLAALRHFTP
DVCQILLDQSLDLAEYNFLFALSFTTPTFDSEVAPSFGTLLATVNVVLNMLAELDKKKEP
LTQAAGLSTQVEGTRTLKSLLMFTMENCFYLLISQAMRYLRDPAVHPRDKQRMKQELSSE
LSTLLSSLSRYFRRGAPSSPAAGILPSPQGKSTSLSKANPESQEPLIQLVQAFVRHVQR
NT seq
4680 nt
NT seq
+upstream
nt +downstream
nt
atgactgagcgccaagtgtctcgctggtttgttcagtgccttcgggaacaatccatgctg
ctagaaattattttcctttattatgcttactttgaaatggtaccaagtgacctattggtg
ttgactaagatgtttaaagagcaaggattcggtggcaggcagaccaataggcatctggtg
gatgagaccatggatcattttgtggatcggattggctacttcagtgcccttattctggtg
gaaggcatggatattgaatccttgcacaagtgtgctctggatgacaggagagaactgcac
cagtttgcccaggatgggcttatttgtcaggatatggaccatttggtgttgacctttggg
gacatttctcatcatgcccctgtacttttgtcctgggctctcctccgtcacaccctgagc
ccagaagagacgagcactttggttcggaaaatagggggcacagccatccagctcaatgca
tttcagtacttgacccagctcctccagtcactcgccagtgggggaaatgattgcaccacc
agcactgcatgcatgtgcatctacggactcctctccttcgtcctgacctcgctggagctg
cacacgctgggcaatcagcaggatataattgacacagcatgtgaagttctggcagaccct
tctcttccagaactattttggggaacagaaccgacctctggtcttgggatcattctggac
agtgtgtgtggaatgtttccccatctcctttccccactcttgcaattgctccgcgccctt
gtgtcagggaaatccactgccaaaaaggtatatagcttcttggataagatgtctttctac
aatgaactctataagcacaagccccatgatgtgatctctcatgaagatggaactctctgg
cgcagacagtcacccagacttctgtaccctctgggaggtcaaaccaaccttcgcatacct
caaggcaccgtgggccaagtcatgctggatgatagggcttatctagtacgttgggaatat
tcctacagcagttggaccctcttcacttgtgagattgaaatgctgcttcatgttgtttca
actgcagatgtgattcaacactgccagcgcgtcaagcctataattgatctggttcataag
gtcatcagtaccgatctatcgattgctgactgcctcctgccaatcacatctcgcatctac
atgctgctgcagcggctaacgactgtgatctccccccctgtggatgtcattgcttcgtgt
gtcaattgtttgactgttttggctgcccggaatccagcaaaggtctggactgatcttcgt
catacagggttcttaccatttgtggctcaccctgtctccaacatgagtcagatgattagt
gcggaaggtatgaatgctggaggctatggaagcctcttgatgaacagtgagcaaccccaa
ggggagtacggggtcaccattgcctttctgcgcttggtcactactcttgtcaaggggcag
ctgggtagtacccagagccaagggcttgtgccttgtgtcatgttcgtgctgaaggagatg
ctccccagctaccacaagtggcgctataactcccacggagtgagagagcagattggttgc
ctgatcttggagctgatccatgcaatactgaacctgtgccacgagacagatctgcacagc
agtgacacacccagccttcagtatctctgtgtctgcagtctggcctacacagaagcagga
cagacagttatcaatatcatgggcattggcgtggacaccattgacatggtaatggcagct
catccccgaagtgacggggcagagggccagggacaaggccagctgctgattaagactgtg
aaactggcattctccattaccaacaatgttatccggttgaaggctccctctaatgtggca
tcccccctggagcaagctctcacacaacataatggtgcccatggaaacaacctgattgct
gttctagccaaatacatctaccacaagcatgaccctgctctgccacgtcttgccatccag
ctgctgaaacgtttggccacggtggccccaatgtcggtgtatgcctgcctgggcagtgat
gcggctgctattcgtgatgccttcctgatccgactgcaaagcaagattgaggatatgcgc
atcaaagtcatggtcctggaattcctcacagtggcagtggagacccagccgggcctcact
gagctgtttctgaacctggaggtgaaggacggcagtgatggttctaaggaattcagcctt
ggcgtgtggagctgtctacatgcggtgctggagctgattgactcccagcagcaggatcga
tactggtgtccacccctgctgcatcgggccgccatcgcctttctgcatgccctgtggcag
gaccgccgcgacagtgccatgctggtactccgaactaagcccaagttttgggagaattta
accagcccgctctttggaaccctttctcctccttcagaaacctctgagcccagcatcctg
gaaacctgtgccctaattatgaagatcctttgcttggagatatactatgttgttaagggc
tcactggaccagtcattaaaagataggctcaagaagttttccagtgaaaaacgctttgcc
tactggtcaggttttgtcaagtccttggccgttcacatggcagagacagaaggcaacagc
tgtacctctttggtcgagtaccagatgctggtctctgcctggcggatgcttctcatcatt
gccaccagtcacgtggacataatgcacctgaccgactctgcagtgcgtcgccagctcttt
cttgatgtgcttgatgggaccaaagccttgctcctcgttccaacttcagtgcactgcctc
cgccttggctccatgatgtgtactctgctgctgatcctcctccggcaatggaagagagag
ttaggttctgtggatgatattctgggccccttgacggagatcctagagggagtgctgcag
gcagaccaacagctcatggagaagaccaaggccaaggtgttttccgcattcatcaccgtg
ttgcagatgaaggagatgagagtaggtgacatcccccagtactcccagctggtgttcagc
gtctgcgagaccctccaagaagaggtgattgcactcttggaccagacccgtcacagcctg
gcctcgggcactaccccagaggacaaggacagtatggagacagacgattgctctcggcct
cggcacaaggaccagcgggatgggcaggtgtgcgtcctggggctgcacctggccaaggag
ctgtgtgaggtggatgaagatggtgactcatggctgcaggtgacccgcagactccccatc
ctgcctaccctcctcactgccttggaagtgagccttcgcataaagcagaacctgcatttc
accgaggcctcattgcacctgctactcaccctggctcgcacccagcagggagccacagct
gtggctggagccggcatcacccagagcatttgtctgccccttcttagcgtgtaccagctc
agctccaatgggacggtgcagacacctagcacttatcgcaagtccctagatgccccctct
tggccaggggtctaccgcctgtccatgtccttgatggagaggttgctcaaaaccctgcgc
tacaacttcctgactgaggccttggacttcgtgggtgttcaccaggagcggaccttacag
tgcctgaacgcagtgaggacggtgcagagtttggcctgcctcgaggaggcggaccacact
gtgggcttcatcctgcaactctccaacttcgtgaaggaatggcacttccacctgccgcag
ctcatgcaagatgtccaggtaaacttatgttacttatgccaggcctgtacctccctccta
catagccgcaagatgctgcagcactgcttacagaacaaaaatggggatgccatgccctca
gcagtcggcccccgaggccagcggccacccacagctgccccggcggctccctcttgctct
gcctccaagcagcagactgctgacacagaggccgcgcaacagcgagccctgcacactgtc
cagtatggccttctgaagatcctcagcaggactctggcagccctgcgccacttcactccc
gatgtctgtcagatcctgctggatcagtccctggaccttgctgagtacaactttctattt
gccctaagcttcaccacccccacctttgactccgaggtggccccttccttcgggaccctt
ctggccacagtgaacgtggttctgaacatgcttgcagagctggacaagaagaaggagccc
ctcacgcaggccgcagggctcagcacacaggtggaagggaccagaacattaaagtccctc
ctgatgtttactatggagaactgcttttacctgctcatctcccaggcaatgcggtacctg
agggacccagctgttcacccccgagataagcagcgcatgaagcaggagctcagctcagag
ttgagcacgctgctctccagcctctcacgctacttccgtcggggagcacccagctcccct
gctgctggcatcctcccctcgcctcagggcaagtccacctctctctccaaagccaaccct
gagagtcaggagcctctgatccagctggtgcaggccttcgtccggcatgtacaaagatag
DBGET
integrated database retrieval system
