Echinops telfairi (small Madagascar hedgehog): 101638708
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Entry
101638708 CDS
T08707
Symbol
SHANK1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
101638708 (SHANK1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SH3_2
Ank_5
PDZ_6
PDZ
SH3_1
SH3_9
FERM_f0
Defensin_2
Motif
Other DBs
NCBI-GeneID:
101638708
NCBI-ProteinID:
XP_045148550
LinkDB
All DBs
Position
Unknown
AA seq
1124 aa
AA seq
DB search
MPHSPASSEDEHHSASECPEGGSESDSSPDGPGRGPRGTRGRGSGAPGKLASVRGLQGRS
MSVPDDAHFSMMVFRIGIPDLHQTKCLRFNPDATIWTAKQQVLCALSESLQDVLNYGLFQ
PATSGRDANFLEEERLLREYPQSFEKGVPYLEFRYKTRVYKQTNLDEKQLAKLHTKTGLK
KFLEYVQLGTSDKVARLLDKGLDPNYHDSDSGETPLTLAAQTEGSVEVIRTLCLGGAHID
FRARDGMTALHKAACARHCLALTALLDLGGSPNYKDRRGLTPLFHTAMVGGDPRCCELLL
YNRAQLGIADENGWQETHQACQRGHSQHLEHLLFYGAEPGAQNASGNTALHICALYNKET
CARILLYRGANKDVKNNNGQTPFQVAVIAGNFELGELIRSHREQDVVPFQESPKYAARRR
GAQSAGLTVPPALLRANSDTSMALPDWMVFSAPGASSSGTPGPTSGPQGSSQPPAPSTKL
SSGTLRSASSPRGARARSPSRGRHPEETKRQARGRPSSSGTPREGPAGGTGGSGGPGGSL
GSRGRRRKLYSAVPGRSFMAVKSYQAQGEGEISLSKGEKIKVLSIGEGGFWEGQVKGRVG
WFPSECLEEVANRSQEGKQESRSDKAKRLFRHYTVGSYDSFDAPSLMDGIGPGSDYIIKE
KTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGDF
LIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTRHPDMDEAVHKKAPQQAKRLPPPA
ISLRSKSMTSELEEMVSPWKKKSEYEHQPAPMPSMEKKRTVYQMALNKLDEILAAAQQTI
SASESPGPGGLASLGKHRPKGFFATEGRRGEPLPDTTQEVLECSVNQVSMGLLVLTCKSV
GNHFTLPPSLPQRFWAAEDDRPYLAPPAMKFSRSLSVPGSEDIPPPPTTSPPEPPYSTPP
APSSSAEGPPVALPAASSLPRKLLPWEEGPGPPPPPLPGPLGPPPASALATVKASIISEL
SSKLQQFGGSAVAGGALPWARGGSAGSTDGHHGGPSYIPERTSSLQRQRLSDDSQSSLLS
KPVSSLFQNWHKPPLPPLPTATGVPPSAAAAAPGATSPAASSST
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgccccacagccccgcgtccagcgaggacgaacaccacagtgccagcgagtgtcccgag
gggggctcagagtccgacagctccccagacggacccgggagaggcccccgggggacccgg
ggccggggcagtggggcacctggtaagctagcctcagtccgaggcctccaaggccgttcc
atgtccgtccccgacgacgcccacttcagcatgatggtcttcaggattggtatcccggat
ctacaccagacaaaatgccttcgtttcaacccggacgccaccatctggaccgccaagcag
caggtgctgtgcgccctgagtgagagtctacaggatgttctaaactatggcctgttccag
ccggccacctcaggcagggatgccaacttcctggaggaggagagattgctgcgcgagtat
ccccagtcctttgagaagggggtgccctacctggagtttcgatacaagactcgagtttac
aagcagaccaacctggatgagaagcagctggccaagttgcacacgaagacggggttgaag
aaattcctggaatacgtgcaactcgggacgtccgacaaggtggcaaggctcttggacaaa
gggctggaccccaattatcatgattcggattcgggagagacccccttgacactggctgcc
caaactgaaggatccgtggaggtgattcgaaccctgtgcctgggcggagcccacatcgac
ttccgggcgcgggatggcatgaccgccctacacaaagccgcatgtgcgcgacactgcctt
gcgctcacggcgctcctggaccttgggggctcccccaactacaaggaccgccggggcctg
acccctctcttccacacggctatggtagggggtgaccctcgctgctgtgagctgctgctg
tacaacagagcccagctgggcatcgccgatgagaatggctggcaggaaacccaccaggcc
tgccagcggggtcactctcagcacctggaacacctgctcttctatggggctgagcctgga
gcccagaatgcctccgggaacacggccctgcacatctgcgccctctacaacaaggagacc
tgcgccaggatcctgctgtacagaggggccaacaaagacgtcaagaacaacaacggccaa
acgcccttccaggtagcagtgattgctgggaattttgagctgggggagttaatcagaagt
catcgagaacaggatgtggtgcccttccaagagtcccccaagtacgcagcccggcgtcgc
ggagcccagagcgcagggctgacagtacccccagcgctgctccgcgccaacagtgacacc
agcatggccttgcccgactggatggttttctcagcgcccggggcctcctcctcaggcacc
cccggcccaacctcagggccccagggctcgtcccagcccccagcccccagcaccaagctc
agcagcgggaccctccgaagtgccagcagcccccgcggagcccgggcgcgctccccctcc
cgcgggagacaccctgaggagaccaagaggcaggcccgaggacggcccagctccagcggg
acgccccgagaagggcctgccggaggcacagggggctcggggggccctgggggctccctg
ggcagtcgcgggcggcggagaaagctttactctgcggttcccggacgctctttcatggcc
gtgaagtcctaccaggcacaaggcgagggggagatctccctgagcaagggcgagaagatc
aaagtgctgagcatcggggaaggcggcttctgggaaggccaggtcaaaggtcgagttggc
tggtttccctcggagtgcctggaagaggtggctaaccgctctcaagaagggaagcaagaa
agccgcagtgacaaggcaaagaggctcttccggcattacactgtgggctcctatgacagc
tttgatgccccaagcttgatggatggcattggcccagggagtgattacatcatcaaggag
aagacagtcttgctgcagaagaaggacagtgaggggtttgggttcgtgctccggggggcc
aaggcgcagacccctatcgaggagttcacccccaccccggccttcccggcgcttcagtac
ctggagtctgtggacgaagggggcgtggcctggagagctggacttcgcatgggcgacttc
ctcatcgaggtgaacgggcagaacgtggtcaaggtcggccaccgccaggtggtgaacatg
attcgtcaggggggcaacactctgatggtcaaggtggtgatggtcacccggcacccagac
atggatgaagccgtccacaagaaagctccccagcaggcaaagcggctcccacccccggcc
atctcgttgcgttctaagtccatgacctctgagctggaggagatggtctccccctggaag
aagaagagtgagtatgagcaccagcccgcgccgatgcccagcatggagaaaaaacgcacc
gtgtatcagatggcgctcaacaaactggatgaaatattggcagcggctcaacagaccatc
agtgccagcgagagccctgggcctggtggcctggcgtccctgggcaaacaccggcccaag
ggcttctttgccactgaggggaggaggggggagccgcttcctgatacaacacaggaagtt
ttagagtgctcagtaaaccaggtaagcatgggcctacttgtgcttacttgcaaatctgta
gggaaccatttcacacttcccccctcactgcctcagagattctgggctgcggaagatgac
agaccctacctagcgcccccagccatgaagttcagccgcagcctgtctgtgcctggctcg
gaggacatccctccgccgcccaccacgtccccacctgaacccccttacagcacgccccca
gccccctcctcctctgccgaagggccgccagtggctttgccggctgcctcctcgctgccg
cggaagctattgccttgggaggagggcccgggacccccgccgccaccgctgcctggaccc
ctgggcccgcccccagcttcagccttggccaccgtgaaggccagcatcatcagcgagctc
agctccaagctgcagcagtttgggggctccgcagtggccggcggagctctgccctgggcc
aggggaggcagcgcaggcagcaccgacggccaccacgggggacccagctacatccctgag
agaacatcctccctgcagcggcaaagactctccgacgactcgcagtcctcgcttctctcc
aaaccggtcagcagcctgtttcaaaactggcacaagccacccctgccgccactccccacc
gcgacaggggtccccccttctgctgccgccgcggccccgggggccacttcgcccgcggcg
tcctcctccacg
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