Echinops telfairi (small Madagascar hedgehog): 101638976
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Entry
101638976 CDS
T08707
Name
(RefSeq) endoribonuclease Dicer-like
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
101638976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
etf03036
]
101638976
Chromosome and associated proteins [BR:
etf03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
101638976
microRNA pathway
RISC loading complex
101638976
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dicer_platform
Ribonuclease_3
Dicer_PBD
Ribonucleas_3_3
PAZ
Dicer_dsRBD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
101638976
NCBI-ProteinID:
XP_045154133
LinkDB
All DBs
Position
Unknown
AA seq
1449 aa
AA seq
DB search
MMNALERHTCQPCEMVAACGPLASRSELYDRLRMELEETLLFVKDCSVPVHSHTRNSIFI
SRQILSDCLEVLMELGPWGADQVAGLRVQELQERLEQEQVELHRKFLLLADTCLRQVHAL
CGRHFATAANPLDPKFLTPKATMLLEILRQYRPRERQQFESVLRSCQQNQGGYVSWGDFE
EDDEEDEEIEEEKPETNFQAPCTNFLCGIIFVEQRYTAVALNRLIKEASKQDPELAYISS
NFITGYSTETDQPQDNQMEAEFRKQEEVLRKFRAHETNLLIATNWVESVALPECNLVVSF
DLPTEYQSYLQSKGRARAPISNYIMLADMDRVKSFEEDLRTYKAIEQILSDKSSKLVDSR
ETNVEPLVDDDNVIPPYVLRPDDRGPRVTINTDIGHTKRALAVSLCSLGELDDHLMLVGE
EMVKYEEELDLHDEEETSIWGRPGSRKRRQCYPKAIPECLRDSYPQPERPCYLYVIGMAL
TTPLPDEFNFKRRKLFPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFT
LSIQMRELISRLHQYIFSHILRLEKPALQFKPTDADSAYCILPLNIVNDSSTLDIDFKFM
EEIEESEARLGIPSTKYSKETPFVFKLEDYQDAIVIPRYRNFDQPHRFYVEDVHTDLSPL
SKFPSPEYETFAEYYKTKYNLDLTSLSQPLLGVDHISSRLNLLKPRHWNQKGEALPLSNA
EKRKAQNESVQNKQFLVPELCAIHPIPASLWRKALCLPSILYRFHCLLSAEELRAQMARD
TGLGIRSLPADFGYPNLDFGWTNSRGSKSFISISNSSAENDNPCQHSVMVGPGHAAHQGT
SKSPPPKHHHQMSVSCRAPLLEPLGKTLTNALSDLITMKGLSYSKPLASGGHKLADRDFC
QEHQPSDRPQEVSVQPPTSYPILSSDHSENQLKPSEDCAPPGQKHLEGNANQSTSDGSPL
PGVPGPCSTPRGRVDSEQGPPALRYSSTTLGPKPGLILQALTLSNASDGFNLERLEMLGD
SFLKHATTTYLFCTYPEAPEGHLSYMRGKKVSNSNLSRLGKKKGLPSRMVVSMFDPHVNW
LPPGYVVNQDKSHADQWDKDDMKRGYVLEMGKPDRDAKEEEDGEEALLWRTPEANYEDDE
SCGAEAARLSISYDLHTEQCITDKSIADCVEALLGCYLTSCRERAAQLFLCSLGLQVLPL
DSHAASKPRSPTSGLRSREYGCLQIPPRCMLNHPDTNKTLNHLISGFKAFEESINFRFKN
KAYLLQAFTHASCHVNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSAL
VNNTVFASLAVKYDFHKYFQAASPTLVDVIHGFVQFQLEENWPQGMDSELRRLQEDQEKE
EGIQVPKAMGDIFESLAGAIYMDSGMSLETVWKVYYPMMRPLIEKFSTNVPRSPVRELLE
MEPEMVKFR
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatgcattggagagacacacatgccaaccgtgcgagatggtggccgcctgcggg
ccgttggccagcagaagcgagctgtatgacaggctgcggatggagctggaggagaccctt
ctctttgtcaaggactgcagtgtccctgtgcactcccacaccagaaactccattttcatt
tcgagacagatcctctcagactgcctcgaggtgctgatggagctgggcccctggggtgcg
gaccaggtggcagggctgagagtgcaggagctgcaggagcgcctggagcaggagcaggtg
gagctgcaccgcaagttcctgctcctggccgacacctgcctgaggcaggtgcacgccctc
tgcggaaggcacttcgccaccgccgccaaccccctggacccgaagttcctgacgcccaag
gccaccatgctgctggagatcctgcgccagtacaggccccgggagcggcagcagttcgag
agcgtcctgcgcagctgtcagcagaaccaggggggctacgtgtcttggggcgatttcgag
gaagacgatgaggaagatgaagagattgaggaggagaaaccagaaacaaacttccaggct
ccctgcaccaacttcttgtgcgggatcatttttgtggagcagcgatacaccgccgttgcc
ctgaatagattgataaaggaagccagcaaacaggacccggagttggcttatatcagcagc
aatttcattactggatacagcactgagacagaccagccccaagacaaccaaatggaggct
gagttcaggaaacaggaagaggtccttaggaaatttcgagcccatgagaccaacctgctc
attgcaaccaattgggtagagagtgtggctctcccggaatgcaatttggtggttagtttt
gatttgcccacagagtatcagtcttaccttcagtccaagggaagagccagggccccgatc
tctaattacatcatgctcgcagatatggacagggtaaaaagcttcgaagaagaccttaga
acttacaaggcaattgaacagatcttgagcgacaaatcctccaagttggtggactctcgt
gagaccaacgttgagcctcttgtggacgatgacaatgttatcccaccatatgttctcagg
ccggatgacagaggccccagggtcaccatcaatacggacattggacacaccaaacgggcc
cttgcggtcagtctctgttctttaggtgagctggatgaccacttgatgctggtgggggaa
gagatggtgaaatatgaagaagagcttgatttgcatgatgaagaagaaaccagcatttgg
ggaagaccaggttccagaaaacggaggcagtgctacccaaaagcaattcccgagtgtctt
cgagatagctaccctcagcccgagcggccctgctacctgtatgtgattggcatggctctg
acgacacctttgccagatgagttcaacttcaagaggaggaagctcttcccgcccgaggat
accaccagatgctttggcatactgacagccaaacccatccctcagatccctcacttccct
gtgtacacccgttcgggcgaggtcaccatatccatagagctaaagaagtctggcttcacc
ttgtctatccaaatgcgtgagctgatttcgagactccaccagtatatcttctcgcacatt
ctgcgccttgaaaaaccagccctccaatttaagccaacggatgctgactcggcatactgc
attctacctctcaacatcgttaatgactccagcactttagacattgactttaaattcatg
gaagaaattgaggaatctgaagctcgcctgggcattcctagtacaaagtattcaaaagaa
acgccctttgtgttcaaattagaagattaccaggatgccattgtcattccaaggtaccgc
aattttgatcagccccatcggttttacgtcgaagacgtgcacactgatctctccccactc
agcaaatttccttcccctgaatatgagacattcgccgagtattataaaacaaaatacaac
ctggatctgaccagtctcagccagcccctgctgggcgtggaccacatatcttcccgacta
aatcttctgaagcctcgccattggaatcagaagggggaggcccttcctctaagcaatgct
gagaagagaaaagcccaaaacgaaagcgtgcagaataagcagttcctggttccggagctc
tgtgctatccaccccatccctgcatcgctctggaggaaagccttgtgtctccccagcatc
ctgtaccgcttccactgccttctctccgcagaggagctgagggcccagatggcccgtgac
accggcctgggcatcaggtccctgcccgcggattttggctacccaaacttagacttcggg
tggacaaactccagaggcagcaaatccttcatctcgatttctaattcttcagccgaaaat
gacaatccatgtcagcacagtgtaatggtaggccctggtcatgctgcacatcaaggtact
agtaagagcccccctcccaagcaccaccaccaaatgtctgtaagctgcagagcgcccctc
ctcgagccactgggtaagaccctcaccaacgccctgagtgacctcatcacaatgaaaggt
ctctcttacagcaaacctcttgccagcggcggccacaagttagcagacagagacttttgc
caagagcatcagccgagtgaccgccctcaggaagtctctgtacaaccacctacctcatat
cccattctgagttcagaccactctgagaaccagctcaagcccagtgaagactgtgcccca
cctggtcaaaagcacctggagggaaatgctaaccaatccacctcagatgggagcccccta
ccaggcgtcccggggccctgcagcaccccgaggggcagggtagattctgagcagggtccc
cccgcacttaggtattcctcaacgaccctcggccccaaacctgggctcattctccaggct
ctgaccctgtccaatgccagcgatgggtttaacctggagcggctggagatgctgggcgac
tccttcctgaagcacgccaccaccacctacctgttctgcacttaccctgaggctccagag
ggccacctctcctacatgaggggcaaaaaggtcagcaacagtaacctttctcgcctcggg
aaaaagaaaggcctgcccagccgcatggtggtctccatgtttgacccccatgtgaactgg
cttcccccaggctacgtcgtcaaccaggacaaaagtcacgcagaccagtgggacaaagat
gacatgaaaagaggctacgtgctggagatgggcaagccggacagggacgctaaggaggaa
gaggacggggaggaggccctgctgtggaggactcccgaggccaactacgaagacgacgag
agctgcggtgctgaggcagccaggctgtccatctcctatgacctgcatacggagcagtgc
atcaccgacaagagcatcgctgactgcgtggaggccctgctgggctgctacctgaccagc
tgcagggagcgggcagcccagctcttcctctgctccctgggcctgcaggtgctcccactg
gactcccatgcagcctcgaagccccggtcccccacctcgggcttgcggagccgggagtat
ggctgcctgcagattccccccaggtgcatgctcaaccacccagatacgaataagactctg
aaccacctgatctcgggcttcaaggcctttgaggaaagcatcaacttcaggtttaagaac
aaggcataccttctccaggcgttcacgcatgcctcctgccatgtaaacaccatcactgat
tgttaccagcgcctggaattcctgggcgatgccatcctggactacctcatcaccaagcac
ctttatgaagacccgaggcagcactccccgggggtcctgaccgacctgcgctccgctctg
gtcaacaacaccgtctttgcctcgctggctgtcaagtacgacttccacaagtacttccag
gctgcctcgcccacgctcgtcgacgtcatccatggcttcgtgcagttccagctggaggag
aactggccgcaagggatggactccgagctcaggagacttcaggaggaccaagagaaggaa
gagggcattcaagtccccaaggccatgggggacatttttgagtcactcgccggtgccatc
tatatggatagtggcatgtcgctagagacggtgtggaaggtgtactaccccatgatgcga
ccactgatagagaaattctccacaaatgtgccccgttctcctgtgcgagaattgcttgaa
atggagccagaaatggtcaaatttaggtaa
DBGET
integrated database retrieval system
