Echinops telfairi (small Madagascar hedgehog): 101639332
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Entry
101639332 CDS
T08707
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
101639332 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
etf03021
]
101639332 (POLR1B)
Enzymes [BR:
etf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
101639332 (POLR1B)
Transcription machinery [BR:
etf03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
101639332 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
101639332
NCBI-ProteinID:
XP_004707992
LinkDB
All DBs
Position
Unknown
AA seq
1135 aa
AA seq
DB search
MEAGGRWRHLPSGPSLKHLTDPSYRLPREQQKPALQELTRAHVESFNYAVRDGLSHAVQA
IPPFEFAFKDERISLTIVDAVVSSPTVPKGSICKELKVYPAECRGRRSTYRGKLTADISW
SVNGVSKGVIKQFLGYIPIMVKSELCNLHSLPPKALIEHHEEPEEMGGYFIINGIEKVIR
MLIMPRRNFPIAMIRPKWKSRGPGYTQYGISMHCVREEHSAVNMNLHYVENGTVMLNFIY
RKELFFLPLGFALKALVSFSDYQIFKELIKGKEDDSFFRNSVSQMLRIVTEEGCATQKQV
LRYLGESFRVKLNLPEWYPSEQAAEFLFDQCICIHLSSNTEKFYMLCLMTRKLFALAKGE
CMEENPDSLMNQEVLTPGQLFLMFLKEKMEAWLVSIKIAIDKKAQKTNVSINTENLLKIF
NLGTDLTKPFEYLLATGNLRSKTGLGFLQDSGLCVVADKLNFIRYLSHFRCVHRGASFAK
MRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTAVCEVVTQFVYTTSIPALLCNLGMT
PVDGAPQRPYSECYPVLLDGVVVGWVEQELAPAIAKSLRNFKVLREKRIPPWMEVALIPM
TGKPSLYPGLFLFTTPCRLVRPVQNLELGKEELIGTMEQLFMNIAIFEDEVFARVTTHQE
LFPHSLLSVIANFIPFSDHNQSPRNMYQCQMGKQTMGFPLLTYRDRSDNKLYRLQTPQSP
LVRPYMYDYYDMDNYPIGTNAIVAVISYTGYDMEDAMIVNKASWERGFAHGSVYKSEFID
LTEKIKQGDDSLVFGVKAGDPRVLQKLDEDGLPFIGARLQYGDPYYSYVNLNTGESFVVY
YKSKEHCVVDNIKVCSNDSGSGKFKCVCITMRVPRNPTIGDKFASRHGQKGILSRLWPTE
DMPFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFIFSEENSALE
YFGEMLKAGGYNFYGTERLYSGISGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDK
VTNQPIGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVQCGSLLSPL
LEKPPPSWSTTRNRKYNCTLCNRSDSIDTVSVPYVFRYFVAELAAMNIKVKLDIV
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgggcggccggtggcggcaccttcccagtgggcctagcctgaagcacttgacc
gacccctcttacaggctcccgcgggagcagcagaagcccgcgctgcaggagctgacgcgg
gcacatgttgagtccttcaactacgccgtgcgagatggcctcagccacgcggtgcaggcc
attcctccctttgaatttgctttcaaagatgagcgcatctctcttaccattgtggatgct
gttgtcagttcacccacagttccaaaggggagcatctgcaaagagctcaaagtttaccca
gcagaatgccggggccgcagaagtacctaccggggaaagctgacagctgatatcagctgg
tcagtgaatggagtctcaaaaggagtcattaagcagtttctcgggtatattcctatcatg
gtgaagtccgagctttgcaacttgcacagtctgcctccaaaagccctcatcgagcaccac
gaggaacccgaggagatgggaggctattttataatcaacggcattgagaaagtcatccgg
atgttgattatgccacggagaaatttccccatcgccatgataagacctaaatggaaaagt
agagggcctggctatactcagtatggcatctcaatgcactgcgtgagggaggagcattct
gctgtcaacatgaaccttcactacgtggaaaatggcacggttatgttaaactttatttac
cggaaagaactgtttttcctccctctgggatttgcactgaaggcacttgtcagtttttcc
gactaccagatttttaaggagctcatcaaagggaaagaagacgactccttcttcaggaac
tctgtgtctcagatgttacggattgtcaccgaggagggctgtgccacacagaaacaggtc
ctgcgctatctcggtgagagcttccgagtaaagctcaaccttcccgagtggtaccccagt
gaacaagcggcggagtttctgtttgaccagtgcatctgtatccacttaagttccaatact
gaaaagttctacatgctttgtctcatgacccggaagctctttgctttagccaaaggcgag
tgtatggaggagaatcctgacagcctaatgaaccaagaagtccttacacctggccagctc
ttcctgatgtttctgaaggaaaagatggaagcttggttagtatctattaaaatagcgata
gacaagaaggctcagaagaccaatgtatccataaacactgagaatttgttgaagattttt
aatctgggaactgaccttacaaaaccatttgagtatcttcttgctactgggaatctgcgt
tctaaaacaggtcttggcttcctgcaagattctggcctgtgtgttgtggctgacaagctg
aacttcattcgctatctttcccatttccgctgtgtgcacagaggagccagctttgccaag
atgaggactaccacagtacgcaggctgctgccagagtcttggggcttcctctgccccgtg
cacaccccagatggggagccctgcggcctgatgaaccacttaactgctgtgtgtgaggtg
gtcacgcagtttgtgtacacaacgtctatcccagctctgctctgcaacttggggatgacg
ccggtggatggggctccgcaacgaccgtacagtgaatgctaccctgtcctgttggatggc
gtcgtggtgggctgggtggagcaagagctcgcccctgccattgccaagtcgctccggaac
tttaaggtgttgagagagaaaagaattcctccgtggatggaggtggcccttatccccatg
acaggaaagcccagtctctacccaggactgttcctttttacaactccttgtagactggta
cgacctgtgcagaacttggaattgggcaaagaagaactgattggaaccatggaacagctc
ttcatgaacattgctatttttgaggatgaggttttcgccagagttaccacacaccaggag
ctcttccctcacagcctgctgagtgtgattgccaacttcatccctttctctgatcacaac
cagagtccccggaacatgtaccagtgtcagatgggtaagcaaactatgggctttccactt
cttacctatcgagaccgatctgataataaactgtaccgtcttcagactccacagagccct
ctagtgaggccttacatgtatgattactatgacatggataactatccaatcgggaccaat
gccatagtcgctgtcatctcgtacactggctatgatatggaagatgccatgattgtaaat
aaagcctcttgggaacgaggctttgcccatggaagtgtatacaagtctgagttcatagat
ctcactgaaaaaattaaacaaggagacgatagcctggtgtttggggtcaaggctggtgat
ccacgggttttgcagaaactagatgaggatgggttgccgtttattggagcacggttgcag
tatggagacccctattacagctacgtcaacctcaacaccggggaaagcttcgtggtgtac
tacaagagtaaagaacactgtgtggtggacaacatcaaggtgtgcagtaatgactcgggg
agtgggaagttcaagtgtgtgtgcatcaccatgcgagtcccgcgcaaccccaccattgga
gataagttcgccagccggcacgggcagaagggcatcttaagcaggttgtggcccactgag
gacatgcccttcactgagagtgggatggtccccgacatcctgttcaatccgcacgggttc
ccgtcccgcatgactatcggcatgctgattgagagcatggctgggaagtcggcggccctg
cacggcctctgccatgacgccacccccttcatcttttcggaggagaactcagccctagaa
tacttcggtgagatgctgaaggccgggggctacaacttctatggcaccgagagattatac
agcggcatcagcgggctggagttggaggctgacattttcatcggtgtggtttattatcag
cgcctgcgacatatggtctccgacaagtttcaggtccgaaccaccggagccagagacaaa
gtcaccaaccagcctatcgggggaaggaacgtccagggtgggatccgttttggggagatg
gagcgagatgcgcttctggcacacggtacctccttcctcctccacgaccggctcttcaac
tgttcggaccgttcggtggcgcacgtgtgtgtccagtgcggtagcctgctctccccactg
ctggagaagccgcccccttcctggtccaccacgcgcaataggaaatacaattgcaccctc
tgtaaccgcagtgactccattgacacagtttccgtgccttacgtttttcgctactttgta
gctgaactggcagcaatgaacatcaaggtgaagttggacattgtttaa
DBGET
integrated database retrieval system
