Echinops telfairi (small Madagascar hedgehog): 101639979
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Entry
101639979 CDS
T08707
Symbol
XNDC1N
Name
(RefSeq) putative short transient receptor potential channel 2-like protein
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
etf04040
]
101639979 (XNDC1N)
Ion channels [BR:
etf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
101639979 (XNDC1N)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRCC1_N
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Motif
Other DBs
NCBI-GeneID:
101639979
NCBI-ProteinID:
XP_045149030
LinkDB
All DBs
Position
Unknown
AA seq
1294 aa
AA seq
DB search
MAPVKISHVVSFSSQDPKYPVENLLNPDRQRGPWLSCPEDKSGQLKVELQLERAVPIGYI
DVGNCGSAFVQIDVGRSSWSLDRPFVTLLPATMLMSLADSKQGKNRSGVRMFKDDDFLAS
ASRESWDRLRLTCSQPFTRHQPFGLAFLRVRSPLDSSDDPITGPSAPESSGPSQGSDAQE
SGSSPWLANPSIRRTFFPDPQKSNKNIAKLKNILKQLQPGTLGRSARMVLSAARRAAPTN
AADPGDNHSGPGSRHPDHSEPRPKKQNSENGASRTKRRKVQDHRFLANSSSQTKGRGTAQ
QRVSQPHSSGQRRQHKSQPHSSGQRRQPQAQSSGAQESGQCPMCAGSFNIEVLPLHAATC
GESSPPQPASPSSSPSSSESVVWVSSPESSPPISWIQCPLCQSYFSAGDVEEHAGMCGDP
QPNWTEIVNKKLKFPPTILGAIQEGRLGLVHQLLEAGLEATGGPLRNVEEAEDRSWREAL
NLAIRLGHEAITDVLLANVKFDFRQIHEALLVAVDTNQPAVVRRLLARLEREKGRKVDTR
SFSLAFFDSSIDGSRFAPGVTPLTLACQKDLYEIAQLLMDQGHTIARPHPVSCACLECGN
ARRYDLLKFSLSRINTYRGIASRAHLSLASEDAMLAAFQLSRELRRLARKEPEFKPEYIA
LESLSQDYGFELLGMCRNQSEVTAVLNDLGEGSETEADGLGQAFEEGIPNLARLRLAVNY
NQKRFVAHPICQQVLSSIWCGNLAGWRGSTTLWKLFVAFLIFLTMPFLCLGYWLAPKSRL
GHLLKIPVLKFLLHSASYLWFLIFLLGESLVMETQLSTFRGRSQSVWEMSLHMIWVTGFL
WFECKEVWIEGLRSYLLDWWNFLDVVILSLYLAAFALRLLLAGLAHMHCWDAPNGTACHY
FTTAERSEWRTEDPQFLAEVLFAVTSMLSFTRLAYILPAHESLGTLQISIGKMIDDMIRF
MFILMIILTAFLCGLNNIYVPYQETERLGNFNETFQFLFWTMFGMEEHSVVDMPQFLVPE
FVGRALYGIFTIVMVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGLTLP
VPFNILPSPKSVFYLLRRIVRVICCCCACCKPKEPDYPPVPTFANPGAGAGPGEGEKGSY
RLRVIKALVQRYIETARREFEETRRKDLGNRLTELTKTVSRLQSEVAGVRQTLAEGRTPR
PPDGASILCRYITRVRNSFQNLGPPIPETPELTVPGVMETQASSETGPQDPGESGPSSPA
HVLVHREREAEEAEDLSQESKGGVLGSGRAPSVV
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctgtgaagatcagccacgtggtgtcattttcctctcaggatcctaagtatcct
gtggagaacctgctgaaccccgacaggcagaggggtccttggctcagctgcccagaggat
aaaagtgggcaactgaaggtggaactgcagctggagagagcagtgcctattggctacatc
gatgttggtaactgtggctctgctttcgtgcaaattgatgtgggtcgttcttcctggtcc
ctggacagaccttttgtcaccctgctccctgcaaccatgctgatgtccctggctgattca
aagcaagggaagaaccgctcaggggtccgcatgtttaaagatgatgacttcctggcctca
gcatcaagggagtcatgggaccgactccgcctcacctgctcccaacccttcactcgtcat
cagccctttggcctggccttcttacgggttcgttcccctctggactcctccgatgacccc
ataacagggccctcagcccctgagagctctgggccgagccagggatctgatgcgcaggag
tctggttccagcccctggctggcgaatccttccatccggaggacattcttcccagatcct
cagaagagcaacaagaacattgcaaagctcaagaacattctgaagcagctgcagccaggg
actcttggccgctcagctcgcatggtgctttctgctgcccgcagggcagccccaaccaat
gcagcagatccaggggacaaccactccggaccaggctccaggcatccagatcactcagag
cccagacccaagaagcaaaactcggagaatggtgcaagcaggacaaagagacggaaagta
caggaccacagatttctagctaactctagctctcaaacaaagggaaggggcacagcacaa
caacgtgtatcgcagccccacagcagtggacagagacgacaacataagtcgcagccccac
agcagtggacagagacggcaaccccaagcccaaagcagtggtgcccaggagagtggacaa
tgtcccatgtgtgctggctccttcaacattgaggttctccccctgcacgctgccacttgt
ggagagagctccccacctcagccagcctctccttcctcatcaccttcttcatctgaatct
gtagtgtgggtttcctcccctgagagctcgccgcccatttcctggatccagtgccctctc
tgtcagtcctacttctcagcgggagatgtggaagagcacgccggcatgtgcggggacccc
cagcccaactggaccgagatcgtcaacaaaaagctgaagttcccacccacgatcctgggt
gccattcaggaggggcggctgggcctggtgcatcagctgctggaggccgggctggaggcc
acgggcgggcccctgcgaaatgtggaagaggccgaggatcgctcctggagggaagctctc
aacctggccatccgcctgggccacgaggccatcaccgacgtgctgttggccaatgtcaag
ttcgacttccggcagatccatgaggcgttgctagtggcagtggacaccaaccagccagct
gtggtgcgtcgcctgctggcccgcctggaacgggagaagggccgcaaagtcgacaccagg
tccttctccctggctttcttcgactcatcgatcgatggctcccgctttgcccctggcgtc
acgccactcacgctggcctgccagaaggacctgtatgagatcgcgcagctgctcatggac
cagggccacaccatcgcccggccccaccccgtctcctgcgcctgcctggagtgcggcaac
gcccgccgctacgacctgctgaagttctccctgtcccgcatcaacacctaccgcggcatt
gccagcagggcccacctctcgctggccagcgaggacgccatgctggctgccttccagctc
agccgcgagctcaggcgcctcgcacgcaaggagcccgagttcaagccagagtacattgcg
ctggagtcactgagccaggactacggctttgagctgctgggcatgtgccggaaccagagt
gaggtcacggcggtactcaacgacctgggcgagggcagcgagacggaggctgatggcctg
ggccaggcctttgaggaaggcatccccaacctggcgaggctgcggctggccgtcaactac
aatcagaagcggttcgtagcacaccccatctgccagcaagtcctgtcctccatctggtgt
gggaacctggccggctggcgtggaagcaccaccctctggaagctctttgtcgccttcctc
atcttcctcaccatgcccttcctctgccttggctactggctggcgcccaagtcccggctg
ggccacctgctgaagatcccggtactgaagttcctgctgcactccgcctcctacctgtgg
ttcctcatcttcctgctgggagagtccctggtcatggagacccagctcagcaccttccgt
ggccgcagccagagcgtgtgggagatgtccctacacatgatttgggtcacaggcttcctg
tggttcgagtgtaaggaggtgtggattgagggcctgcgcagctacctcctggattggtgg
aacttcctggatgtggtcatcctgtcgctgtacctggcggccttcgccttgcgcctcctc
ttggctggtcttgcccacatgcactgctgggatgcgcccaatgggactgcctgccattat
ttcaccactgctgagagaagtgagtggcgcaccgaggacccccagttcttggctgaggtg
ctctttgctgtcaccagcatgctcagcttcacccgcctggcctacattctgccagcccac
gagtcgctgggcacgctgcagatttctatcggcaagatgatcgacgacatgatccggttt
atgttcatcctcatgatcatcctgaccgccttcctttgtggcctcaacaacatctacgtg
ccctaccaggagacggagcggctgggcaatttcaacgagacattccagtttctgttctgg
accatgtttggcatggaggagcacagcgtggtagacatgcctcagtttctggtgcctgaa
tttgtgggccgcgccctctacggcatctttaccatcgtcatggtcatagtgctgctcaac
atgctcattgccatgatcaccaactccttccagaagattgaggatgatgctgatgtggag
tggaagtttgctcgatccaagctctacctgtcctacttccgagaggggctgacactgccc
gtgcccttcaacattttgccctctcccaaatccgtcttctaccttctcaggagaattgtc
cgggtcatttgctgttgctgtgcctgctgcaaacccaaggagccagactatcccccagtg
cccaccttcgccaatcccggggcaggagcagggcctggggaaggagaaaaaggatcctac
cggcttcgagtcatcaaggccctggtccagcgctacatagagacggcccgccgtgagttt
gaggagactcgtcggaaagacctgggcaacagactgacggagctgaccaagaccgtgtct
cgactgcaaagtgaggttgctggagtgcggcagaccctagcagagggacggacaccccgg
ccccccgatggtgccagcatcctctgtcgttacatcacccgagtgcggaacagcttccag
aacctggggccacccatccctgagaccccagagctgaccgtgccgggagttatggaaacc
caagcatcttcagaaacaggaccccaggaccctggagagtctggcccctcctccccagct
catgtgctggtccacagggagcgggaagcagaggaggctgaggacctgtcccaggagtca
aaggggggggtcctaggcagtgggagggccccttctgttgtttag
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