Echinops telfairi (small Madagascar hedgehog): 101640128
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Entry
101640128 CDS
T08707
Symbol
HFM1
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1 isoform X1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
etf03036
]
101640128 (HFM1)
Enzymes [BR:
etf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
101640128 (HFM1)
Chromosome and associated proteins [BR:
etf03036
]
Eukaryotic type
Meiosis-specific proteins
Others
101640128 (HFM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
ResIII
Helicase_C
AAA_22
DEXQc_Suv3
Hfq
Motif
Other DBs
NCBI-GeneID:
101640128
NCBI-ProteinID:
XP_045147855
LinkDB
All DBs
Position
Unknown
AA seq
1498 aa
AA seq
DB search
MLKSNDSMFSLETLFFEKPKETGKYPDNEKSDWFLPPAPLISEIPDTQMLEEEIESYTVF
DQERKSKKLASTIKITNEETHYISPMQNFQFVFSNKYEGDNLNVGGANNSDSSHFTGKLT
YGSSQKYKNCSGTEITLEKNVPDDTIVTNFSEDKGESIAAFQKSLFKTTDNTHGNANSDS
HINSVNTVQTEVNKGKSWNCSNSKQKHQYSDFNLFKASDAFAASEIREGVFKVPSFQAAS
RSHNIQGVTEKDFGSLKPVTEIPAKFRSIFREFPYFNYIQSKALDDLLYTDRNFVICAPT
GSGKTVMFELAITRLLMEVPLPWLNIKIVYMAPIKALCSQRFDAWKEKFGVIGLNCKELT
GDTAMDDLFEIQNAHIIMTTPEKWDSMTRKWRDNSLVQLVRLFLIDEVHIVKDENRGPTL
EVVVSRMKTVQSFSQTSDSEVIPMRFVAVSATIPNAEDIAEWLSDGKRPAICLKMDESHR
PVKLRKVVLGFPCSSNQTEFKFDLTLNYKIASVIQTYSDQKPTLVFCATRKGVQQAASVL
LKDAKFIMNMEQKQRLQKCAASIRDSKLREILIHGIAYHHAGMELPDRKIVEGAFAIGDL
PVLFTTSTLAMGVNLPAHLVIIKSTMHYVGGMFEEYSETDVLQMIGRAGRPQFDSTATAV
IMTRLSTREKYIQMLDCSDTVESSLHKHLIEHLNAEIVLHTITDVNIALEWIRSTLLYIR
ALKNPSHYGFACGLTKDGIEEKLQELCLKNLNDLSSLNLIKMDEDVNFFKPTEIGRLMAL
YYITYETVKKCCTISGTETLSDLVIMIASCKEFSDVQLRINEKKTLNTLNKDPNRVTIRF
PMEGKIKTREMKINCLIQAHLGCIPIQDFALTQDTAKIFRNGSRITRWLSDFVAAQKNNF
AVLLNSLILAKCFRCKLWENSLHVSKQLEKIGISLSNAMVNAGLTSFKKIEGTDARELEL
ILNRHPPFGTQIKETVMHLPKYELEVEQVTRYSDTMGEILVTIILRNFEQLQTKRTASDS
HYVTLIIGDADNQVVFKHKIMDSVLLKDGNWTKKIDVKRTLKSEDLSINLISSEYVGLDI
QKTFTVFYLGPKRFENEVIMHRKSEIEISHSKHTDKSVAGADKGMTARKKLGNRECNHHC
KNKRACGHDCCKIGVALKSGIKEPTISLYLSDLRNRNAVSSLPPVKRLKMQMNKTQSLDL
KEFGFTPKSSLLNVSRSEYSNIHELPIMEQWEQHEICGKYHQEPSKSQNTDFSSWTHTTT
SNEKAPQTMLLNRNFASRNQNLTDATKSNSSFPEDLNVNFELGNEVWDDFDDECLIEVTN
FLTETDKTKTTGFGNTLSSSTRGHKLTFQESKTQFKREMSKSGSQAPAGSSSLLLEEAIS
PVNEFLPSVSSHEEPDLYLSNSTISKFSASSTTKLPQQAETTNIVYLQEKEQQSLSPEIK
KLYFPYPEEKLNYSTSAPELDFFIRKNECKKEIDFSRYHSDDAADDTKSFLGIFDGIF
NT seq
4497 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaatcaaatgacagcatgttttctttggagactttgttttttgaaaaaccaaag
gaaactggaaaatatccagacaatgaaaaatcagattggtttctcccacctgccccactg
atttcagaaattccagatactcagatgttagaggaagaaatagaaagttatacagtattc
gatcaggaaaggaagtcaaaaaagttagcatctactataaagataactaatgaagaaaca
cattatatttcaccaatgcaaaatttccaattcgtcttctctaacaaatatgaaggagat
aatctaaatgtaggaggggccaataacagtgactcatcacactttactggcaagctgaca
tatggttcttcacagaaatacaaaaattgcagtggaactgaaataacgcttgagaaaaat
gtccctgatgacacaatagtaacgaatttttcagaggataaaggagagagcatagcagca
ttccaaaaaagcttatttaaaacaactgataacacacatgggaatgcaaattcagattct
cacattaactcagtgaacactgtgcaaacggaagtgaacaaaggaaaatcttggaactgt
agcaacagtaagcagaaacatcagtattccgacttcaacctgttcaaagcaagtgatgct
tttgctgcgtctgaaatcagagaaggcgtattcaaagtaccatcttttcaagctgcatct
cggtctcataatattcaaggggtgactgaaaaagattttggttccttgaagcctgtcaca
gaaatcccggcaaagtttagaagtattttcagagaattcccatatttcaactacatacag
tccaaggccttagatgatcttctttacacagataggaattttgtgatttgtgcaccgact
ggttctgggaaaactgtgatgtttgaattggctataacaagattgctgatggaagtgcca
ttgccatggttgaacattaaaattgtttacatggcaccaataaaagctctgtgcagtcag
cgttttgatgcctggaaagaaaaatttggagtaataggtttgaattgtaaagaactcact
ggtgataccgccatggatgatctatttgagattcagaatgcccatattattatgacaact
ccagaaaaatgggatagtatgactaggaaatggagagacaactctttggtccaactggtt
cgtctgtttctaattgatgaggtacatattgtaaaagatgagaatcgtggtcctactctt
gaagttgtagtaagcagaatgaaaactgtacagtctttttctcagacttcagacagtgaa
gttattccaatgagatttgtagctgtatctgcaacgattccaaatgctgaagatattgca
gaatggctttcagatggtaagagacctgctatctgtctgaaaatggatgagagccacagg
ccagtgaaacttcgaaaagtggtccttggatttccctgcagtagtaaccaaactgagttt
aagtttgatctgaccctcaattacaaaatcgccagtgttatacaaacgtactctgatcag
aagcccacacttgtgttttgtgcaacaaggaaaggtgtgcaacaagctgcttctgttctt
ttgaaagatgctaaattcattatgaatatggaacagaaacaaaggttacagaagtgtgca
gcttctataagagattcaaaactgagagaaatattaatacatggtattgcttatcatcat
gctggcatggagctgccagatagaaaaatagttgagggagctttcgccattggagatcta
ccagttctttttactaccagtacattagctatgggagtaaatttgcctgctcatctagta
attatcaaatcaacaatgcattatgttggaggaatgtttgaagagtacagtgaaacagat
gttctacagatgattggtagagctggtcgacctcaatttgatagtacagctactgcagtt
attatgactcgattaagtaccagagagaagtacattcagatgttagattgtagtgatact
gtagaaagcagtttgcataaacatctcattgaacatttaaatgcagagatagtattgcac
accatcacagatgtgaacattgctttggaatggatacgctcaaccttgctttatatcaga
gccttgaaaaatccatctcattatggttttgcttgtggattgaccaaagatggtattgaa
gaaaaattgcaagagttatgtttgaagaatctaaatgatctatcatctctaaatttgata
aagatggatgaagatgttaatttcttcaaaccaactgagataggaagattgatggctttg
tattatattacatatgagacagtgaagaaatgttgtacaatcagtggaacagaaacttta
tcagatctggtcataatgatagccagctgcaaggaattttcagatgtccagttaaggata
aatgaaaagaaaacattgaatactttgaacaaagatccaaatcgggtaactatcagattt
ccaatggaaggaaaaattaaaactagagaaatgaaaataaattgtcttattcaggctcac
ctaggatgcattcccatacaggattttgctttgacacaagatacagcaaagatcttcaga
aatggctcacggattacaagatggttgtcagattttgtggctgctcaaaagaataatttt
gctgtactcttgaacagtttgattttagctaaatgttttaggtgtaaactttgggaaaat
tctctgcatgtatccaaacagctggagaaaattggtatatcattgtcaaatgcaatggta
aatgcaggtttaacttcttttaaaaaaatagaaggaacagatgcaagggaacttgaactg
attttaaataggcaccccccttttgggacccagataaaagaaactgtgatgcatctacca
aaatatgaacttgaagtagaacaggttacaagatatagtgatacgatgggagaaatatta
gtaaccatcattttaagaaactttgaacagctacaaactaaaagaacagcatcagattct
cactatgttaccttaataataggtgatgcagataatcaagtggtttttaagcataaaatt
atggattctgttttgctaaaagacggaaattggactaaaaagattgatgtgaagagaaca
cttaaatctgaagatcttagcataaatctaattagttctgaatatgttggacttgatatt
cagaaaacatttacagtattttacttaggacctaagaggtttgaaaatgaagtaattatg
catagaaaatcagaaatagagatttctcattctaaacatacagataaatctgtagcagga
gccgataaagggatgacagcccgcaaaaaactaggaaaccgggagtgtaatcatcactgt
aaaaataagcgtgcatgtggacatgattgctgtaaaattggagttgcactgaagtcagga
attaaagagccaacaatttctttatacttgtccgatttaagaaacaggaatgctgtttca
tctcttcctccagttaagcgtctcaagatgcagatgaataaaactcaaagtctggacctt
aaagaatttggctttactccaaaatcttcccttctgaatgtatcaagatcagaatattca
aacatacatgaattgcctataatggagcaatgggagcagcatgaaatttgtggaaaatat
caccaagaaccatctaaatctcaaaacacagatttttctagctggacccatactacaact
tcaaatgagaaggcccctcaaacaatgctattaaacagaaattttgcatctagaaaccaa
aatttgacagatgcaactaaaagcaactcctcgtttccagaagatttgaatgttaacttt
gaattgggaaatgaagtttgggatgattttgatgatgaatgtttaatagaagtgactaac
tttttaactgaaaccgataagacaaaaacaacgggatttggaaacactttgagttcaagc
accaggggacacaagctaaccttccaagaatcaaagacccaattcaaaagagaaatgtca
aaaagtggtagccaggcaccagctggttcttccagtctcctgctagaagaggccattagt
cctgtgaatgaatttcttccctctgtttcatcacacgaggaaccagatctttatttatca
aattctactatttccaagttcagtgcatcctctacgacgaaattacctcaacaagctgaa
actacaaatattgtttatttacaagaaaaggaacaacaaagtctttcaccagagattaaa
aagttatacttcccataccctgaagagaaattaaattattcaacttctgcccctgaactg
gacttttttattagaaaaaatgaatgtaaaaaggagattgatttcagtaggtatcattct
gatgatgcagctgatgacacgaagtctttcctgggaatatttgatggcattttctaa
DBGET
integrated database retrieval system
