Echinops telfairi (small Madagascar hedgehog): 101640842
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Entry
101640842 CDS
T08707
Symbol
COL6A2
Name
(RefSeq) collagen alpha-2(VI) chain
KO
K06238
collagen type VI alpha
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf04151
PI3K-Akt signaling pathway
etf04510
Focal adhesion
etf04512
ECM-receptor interaction
etf04518
Integrin signaling
etf04820
Cytoskeleton in muscle cells
etf04974
Protein digestion and absorption
etf05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
101640842 (COL6A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101640842 (COL6A2)
04518 Integrin signaling
101640842 (COL6A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101640842 (COL6A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
101640842 (COL6A2)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
101640842 (COL6A2)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
101640842 (COL6A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
etf04147
]
101640842 (COL6A2)
00536 Glycosaminoglycan binding proteins [BR:
etf00536
]
101640842 (COL6A2)
Exosome [BR:
etf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101640842 (COL6A2)
Glycosaminoglycan binding proteins [BR:
etf00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101640842 (COL6A2)
Hyaluronan
Extracellular matrix or blood plasma proteins
101640842 (COL6A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Motif
Other DBs
NCBI-GeneID:
101640842
NCBI-ProteinID:
XP_012861085
UniProt:
A0ABM0ZRC3
LinkDB
All DBs
Position
Unknown
AA seq
1020 aa
AA seq
DB search
MFQSTYCALLLWGLVGLLHAQQQEAISPAMADRPNNCPEKTDCPINVYFVLDTSESVTMQ
SPTDSLLYHMQQFVPQLISQLQDSSYLDQVALSWRYGGLHFSDQVEVFSPVGSDRDSFTR
AMQSIRSFRRGTFTDCALANMTQEVRRVGNKKAVTFAVVITDGHVTGSPCGGIKLQAERA
REAGIRLFAVAPNPNLNEQGLRDIANSPYELYRSNYATMYPGTTDINEDTINRIIKVMKH
EAYSECYKVSCLEISGPPGPKGSRGQKGAKGNMGEPGEPGQKGHQGDPGIEGPIGFPGPK
GVPGFKGEKGEFGADGRKGASGLAGKNGTDGQKGKLGRIGPPGCKGDPGNRGPDGYSGDA
GNPGEPGDQGAKGDAGHPGRRGPPGDSGAKGSKGYQGNNGAPGSPGVKGGKGGPGPRGPK
GEPGRRGDPGTKGSPGNDGPKGEKGDPGPEGPRGLAGEVGNKGAKGDRGLPGPRGPQGAL
GQPGKQGSRGDPGDAGPRGDSGPPGPKGDPGRPGFSYPGPRGTPGDKGEPGPRGPEGGRG
DFGVKGDPGRKGEKGEPADPGPPGEPGPRGQKGAPGPEGMPGPPGDPGLTECDVMTYVRE
TCGCCDCEKRCGALDVVFVIDSSESIGYTNFTLEKNFVINMVNRLGAIAKDPKSETGTRV
GVVQYSHEGTFEAIQLDDKRINSLSSFKEAVKNLEWIAGGTWTPSALKFTYNKLIKESRR
QKTRVFAVVITDGRHDPRDDDLNLLALCRNDDVTVTAIGIGDMFNEQHESENLNSIACHN
PRQVRNMTLFSELVAERFIDDMEDILCPDPQIVCPELPCQTELYVAQCTQRPVDIVFLLD
GSERLGEQNFFKARRFVEEVSRRLTLARRDNDPLNARVALLQYGSPQEQRVIFPLTANLT
VIHEALESAQYLNSFSHVGTGIVHAINSVVRSARGGARRHAELAFVFLTDGVTGNESLEE
SVHSMRKQNVVPTVVAVGGDVDMDVLSKISLGDTSAIFREKDYDSLVQPSFFDRFIRWIC
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgttccaaagcacctactgtgcactcctgctctgggggctcgtggggttgctccacgcc
cagcaacaagaagccatttctcctgccatggctgacagacccaataattgcccagaaaag
accgactgccccatcaatgtgtactttgtgctggacacctcggagagcgtcaccatgcag
tcgcccacagacagcctgctctaccacatgcagcagttcgtgccgcagctcatcagccag
ctgcaggacagctcctacctggaccaggtggccctgagctggcgttacggcggcctgcac
ttctccgaccaggtggaggtgttcagcccagtgggcagcgaccgcgactccttcaccagg
gcgatgcagagcatccgctccttccgtcgcggcaccttcaccgactgtgcgctggccaac
atgacgcaggaggtgcggcgtgtaggcaacaagaaggcggtgacctttgccgtggtcatc
actgatggccatgtcactggcagcccctgtgggggcatcaagctgcaggccgagcgggct
cgagaggcaggcatccggctcttcgccgtggcccccaaccccaacctgaacgagcaaggt
ctgcgggacatagccaactcgccgtatgagctgtatcgcagcaactacgccaccatgtac
ccgggcaccacggacatcaacgaggacaccatcaaccgcatcatcaaggtcatgaaacat
gaagcttacagcgagtgctacaaagtgagctgtctggagatctccgggcctcctggtccc
aagggctcccggggacagaagggcgccaaaggcaacatgggtgagccaggagagcctgga
caaaagggacatcagggagatccaggcatcgaaggccccattggattcccaggaccaaag
ggtgttcctggcttcaaaggagagaagggcgaatttggagccgacggccggaagggggcc
tccggcctggctggcaagaacgggaccgatggacaaaagggcaagctagggcgcatcggg
cctccaggctgcaaaggtgaccccgggaacaggggccccgatggctactcaggggatgca
ggcaacccgggggagcctggagaccaaggtgccaagggggacgctggccacccaggacgc
agagggccccctggtgacagcggggccaaaggcagcaagggatatcaaggcaacaatggc
gccccagggagtcccggtgtgaaaggaggcaagggcggacctgggccccgtgggcccaaa
ggcgagcctggacgcagaggcgaccccggaaccaagggcagccctgggaatgatggcccc
aagggggagaagggggatcctggtcccgaggggccccggggcctggccggagaggttgga
aacaaaggcgccaagggggaccgcggcctgcctggacccagaggccctcagggggctctt
ggccagcctgggaagcagggatcacgaggagaccccggtgatgcagggccgcgtggggat
tcaggaccacccggccccaagggagaccccggcaggcccggattcagctacccaggaccc
cgaggaacacctggagacaaaggggagcctggcccacgtggccccgagggaggcagagga
gactttggcgtgaaaggagaccccgggaggaaaggcgagaagggcgagcctgccgatccc
ggcccccctggtgagccaggccctcgggggcaaaaaggagccccgggaccggagggtatg
cctggcccccccggggaccctggtctcacggagtgtgacgtcatgacctacgtgagggag
acatgcgggtgctgtgactgtgagaagcggtgcggtgccctggacgtggtgttcgttatc
gacagctccgagagcatcggctacaccaacttcacgctggagaagaacttcgtcattaat
atggtcaacaggctgggcgccatcgccaaagaccccaagtcggagacaggcacacgtgtg
ggcgtggtgcagtacagccacgagggcaccttcgaggccatccagttggacgacaagcgc
atcaactcgctgtccagtttcaaggaggccgtcaagaacctagagtggattgccggcggc
acctggacgccctcggccctcaagttcacctacaacaagctcatcaaggagagccggcgg
cagaagacgcgcgtgttcgccgtggtcatcacggacgggcgccacgaccctcgggacgac
gacctgaacctgctggcgctgtgcaggaacgatgacgtcactgtcacggccattggcatc
ggcgacatgttcaacgagcagcatgagagcgagaacctcaactccattgcctgccacaac
ccccggcaggtgcgcaacatgacgctcttctccgagctggtggctgagcggttcatcgac
gacatggaggacatcctgtgcccggacccccagattgtctgccctgaacttccctgccaa
acagagctgtacgtggcccagtgcacacagcggccggtggacatcgtcttcctgctggac
ggttcagagcggctgggggaacagaacttcttcaaggcccggcgctttgtggaggaggtg
tcccggcgactgacgctggcgcgccgggacaatgacccgctcaatgcccgcgtggcgttg
ctgcagtacggcagcccgcaggagcagcgggtgatcttcccgctgaccgccaacctgacc
gtcatccacgaggcgctggagagcgcgcagtacctcaactccttctcgcacgtgggcacg
ggcatcgtgcacgccatcaactccgtggtgcgcagcgcgcgcgggggcgcacggcgccac
gccgagctggccttcgtgttcctcaccgacggcgtcacgggcaacgagagcctcgaggag
tcggtgcactccatgcgcaagcagaacgtggtgcccactgtggtggccgtgggcggcgac
gtggacatggacgtgctctccaagatcagcctgggcgacacgtcggccatcttccgcgag
aaagactacgacagcctggtacagcccagcttctttgacaggttcatccgctggatctgt
tag
DBGET
integrated database retrieval system
