Echinops telfairi (small Madagascar hedgehog): 101641199
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Entry
101641199 CDS
T08707
Symbol
NUP54
Name
(RefSeq) nucleoporin p54
KO
K14308
nuclear pore complex protein Nup54
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf03013
Nucleocytoplasmic transport
etf05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101641199 (NUP54)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101641199 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
etf03019
]
101641199 (NUP54)
Messenger RNA biogenesis [BR:
etf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101641199 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
101641199
NCBI-ProteinID:
XP_045139952
LinkDB
All DBs
Position
Unknown
AA seq
563 aa
AA seq
DB search
FLSLSPFFFFPFNFLFVSSPTRLSGFGGLETANSTASGFNFGGFGLTANPAVNFNIGNFG
VSTTSATPFNFGNSLASAGGFGGFGTTTTTAGSAFSFSAPTNTGTTGLFGGTQNKGFGFG
TGFGTTTGTSTGLGTGLGTGLGFGGFNTQQQQQTTLGGLFSQPAQAPAQSNHLIHTASAL
SAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNNNAPVEFTQENPFCRFKAVGYSCMPSN
KDEDGLVVLVFSKREADIRSQQQQLVEALHKVVGGNQTLAVNVEGIKALPDDQTEVVIYV
VERSPNGTSRRVPATPLYARFEQADIKPQLQQLGVILCVPRTELSPAQLKQLLQNPPAGV
DPIIWEQAKVDNPDSEKLIPVPMVGFKELLRRLKVQEQMTKQHQTRLDIISEDISELQKN
QTTTVAKIAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQCELNAP
TQFKGRLNELMSQIRMQNHFGQVRSEERYHIDADLLREIKQHLKQQQEGLSHLISIIKDD
LEDIKLVEHGLNETIHIRGGVFS
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
tttctttctctctctcccttttttttttttccttttaatttcttgtttgtttcttcgcct
acacgcctatcaggatttggtgggcttgagactgccaactccaccgccagtgggtttaat
tttgggggtttcggattaactgctaatcctgcagtgaactttaatattgggaatttcggt
gtgtctaccacttcggcaactccgttcaattttggtaacagtctggcaagtgcaggtggg
tttggaggatttgggaccacaaccaccacagcaggttctgcattcagcttttctgctcca
actaacacaggcactactgggctcttcggtggtactcagaacaaaggtttcggatttggt
actggttttggcacaacaacaggaactagtactggtttggggactggactgggaactgga
ctgggatttggaggatttaatacccagcagcagcagcagacaacactaggtggtctcttc
agtcagcctgcacaagctccagcccagtccaaccatctgatacatacagcaagtgctctc
tctgctccaaccctactgggagatgaaagagatgccattttggcaaaatggaatcagctg
caggccttttgggggacaggaaaaggatattttaacaataacaatgcaccagtggaattc
acccaagaaaatcccttttgccgatttaaggcagtcggttacagttgtatgcccagtaac
aaagatgaagacggcctggtggttttagttttcagcaagagagaagcagacatccgaagc
cagcagcagcagttggtggaagcattgcataaagttgtaggaggaaaccagaccctggct
gtgaatgtggagggaattaaagcattgcctgatgatcagacagaagttgtcatatatgtt
gttgaacgttctccgaatggtacttccaggagggttccagcgacccctctctatgcccgt
tttgaacaggctgacatcaaaccacagctgcagcaacttggagtgatcctgtgtgtgcct
cggacagagctctctcctgcacagctcaaacagctcttacagaacccccctgctggagtt
gaccctattatatgggaacaagccaaggtggataaccctgattcagaaaaattaatccct
gtaccaatggtgggtttcaaagagctgctgagaagactgaaggttcaggagcagatgaca
aagcagcatcagaccagactagatattatatcggaagatattagtgagttacagaaaaat
caaactacaactgtggccaaaattgcacagtacaagaggaaactcatggatctttcccat
agaactttacaggttctaattaagcaggaaattcagcggaagagtggctatgccatccag
gcagatgaagagcagttgagagttcaactagatacaattcagtgtgaactaaatgcccct
acacagttcaaggggcgactaaatgaattgatgtcccaaatccgtatgcagaatcacttt
ggacaagtcagatcagaggaaaggtatcacatagatgcagatctgctacgagaaatcaag
cagcatttgaaacagcagcaggaaggtctaagccacctgattagcatcataaaagatgat
ctagaagatataaagctggtggaacatggattgaatgaaaccatccacatcagaggtggc
gtcttcagttga
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