Echinops telfairi (small Madagascar hedgehog): 101641375
Help
Entry
101641375 CDS
T08707
Symbol
SLC1A6
Name
(RefSeq) excitatory amino acid transporter 4
KO
K05617
solute carrier family 1 (high affinity glutamate/aspartate transporter), member 6
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf04082
Neuroactive ligand signaling
etf04721
Synaptic vesicle cycle
etf04724
Glutamatergic synapse
etf05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
101641375 (SLC1A6)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
101641375 (SLC1A6)
04721 Synaptic vesicle cycle
101641375 (SLC1A6)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
101641375 (SLC1A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
etf02000
]
101641375 (SLC1A6)
Transporters [BR:
etf02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
101641375 (SLC1A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SDF
Motif
Other DBs
NCBI-GeneID:
101641375
NCBI-ProteinID:
XP_004715532
UniProt:
A0ABM0J5W1
LinkDB
All DBs
Position
Unknown
AA seq
562 aa
AA seq
DB search
MSSHANSLFLRESGQRLGRVGCLQQLQENLQQRALRTRLRLQTMTLEHLLRFLRRNAFIL
LTVSAVIIGVSLAFALRPYQLTYRQIKYFSFPGELLMRMLQMLVLPLIVSSLVTGMGSLD
NKATGRMGMRAAVYYMVTTVIAVLIGILMVTIIHPGKGSKEGLHREGRVEPIPTADAFMD
LVRNMFPPNLVEACFKQFKTQYSTRTVTRTIVRTENGSEPSASTSPPSSEDNGTSLLENV
TRALGTLHQVLSFEEIVPVPGSANGINALGLVVFSVAFGLVIGGMKHKGRVLRDFFDSLN
EAIMRLVGIIIWYAPVGILFLIAGKILEMEDMAVLGGQLGMYTLTVIVGLFLHAGGVLPL
IYFLITHRNPFPFIGGLLQALITAMGTSSSSATLPITFRCLEEGLGVDRRITRFVLPVGA
TVNMDGTALYEALAAIFIAQVNNYELNLGQITTISITATAASVGAAGIPQAGLVTMVIVL
TSVGLPTEDITLIIAVDWFLDRLRTMTNVLGDSIGAAVVEHLSQQELDLQEAELTLPSLG
KPYKSLQEKGVSRGRGGNESAM
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccacgccaacagcctgtttctgcgggagagcggccagcggttgggccgagtg
ggttgcttgcagcagctacaggagaacttgcagcagagagcgcttcggacgcgcctgcgc
ctgcagaccatgaccctggagcacttgctgcgtttccttcgccgcaatgccttcatcctg
ctgactgtcagcgcggtgatcattggggttagcctggcctttgccctgcgtccatatcaa
ctcacctaccggcagatcaagtacttctccttcccgggagagttgctcatgaggatgcta
cagatgttggtgctgcctctcattgtctccagcctggtcacaggcatggggtctctggac
aacaaagcaacggggcggatggggatgcgagcagccgtgtactacatggtaaccacagtc
atcgctgtcctcattgggatcctgatggtcaccattattcaccctgggaagggctccaag
gaagggctgcaccgagaaggccgggttgagcccatccccacagcggatgccttcatggac
ctggtcagaaatatgtttccccccaaccttgtggaagcctgcttcaaacagttcaagact
caatacagcacgagaacagtaaccaggaccattgtgaggacagagaatgggtctgagccg
agcgcctccacgtctcctccatcctccgaggacaacgggaccagcctcctagaaaatgtc
acacgggctctgggcaccctgcaccaggtgctgagcttcgaggagattgtgccagtgcct
ggctcagccaatggcatcaatgcactgggcctcgtggtcttctctgtggcctttgggctg
gtcattggtggcatgaagcataaaggccgagtcctccgggacttcttcgacagcctcaat
gaggctattatgcggctggtgggcattattatctggtatgcaccagtgggcatcctcttc
ctgattgctgggaagatcctggagatggaagacatggccgtcctggggggtcaactgggc
atgtacaccctgacagtcatcgtaggcttgttcctccatgctggtggtgtgctccccctc
atctatttcctcatcacccaccggaatcctttccccttcatcgggggcttgctgcaggcc
ctcatcaccgccatgggcacgtcatccagctctgcgacactgcctatcactttccgctgt
ctggaggagggcttgggcgtggaccggcgcatcaccagatttgtgttgcctgtcggggcc
acggtgaacatggacggcacggccctctacgaggccttggctgctatcttcattgcccag
gtcaacaactacgagctcaaccttggccagatcacaaccatcagtatcacagctacagca
gccagtgttggggctgctggcatcccacaggctggtctagtcaccatggtgattgtgctg
acatcagttggcttgcccactgaagacatcactcttatcatagctgtggactggtttctt
gaccggctgcggacaatgaccaacgtcttaggggactcgattggagcagctgttgttgag
cacttgtctcagcaggagctggatcttcaggaagcagagctcaccctccccagcctgggg
aagccctacaagtccctacaggagaagggggtgtccaggggccggggcggcaatgagagt
gccatgtga
DBGET
integrated database retrieval system
