Echinops telfairi (small Madagascar hedgehog): 101641553
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Entry
101641553 CDS
T08707
Symbol
RXRB
Name
(RefSeq) retinoic acid receptor RXR-beta
KO
K08525
retinoid X receptor beta
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf03320
PPAR signaling pathway
etf04659
Th17 cell differentiation
etf04919
Thyroid hormone signaling pathway
etf04920
Adipocytokine signaling pathway
etf04928
Parathyroid hormone synthesis, secretion and action
etf05200
Pathways in cancer
etf05202
Transcriptional misregulation in cancer
etf05207
Chemical carcinogenesis - receptor activation
etf05216
Thyroid cancer
etf05222
Small cell lung cancer
etf05223
Non-small cell lung cancer
etf05226
Gastric cancer
etf05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
101641553 (RXRB)
09152 Endocrine system
04920 Adipocytokine signaling pathway
101641553 (RXRB)
03320 PPAR signaling pathway
101641553 (RXRB)
04919 Thyroid hormone signaling pathway
101641553 (RXRB)
04928 Parathyroid hormone synthesis, secretion and action
101641553 (RXRB)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101641553 (RXRB)
05202 Transcriptional misregulation in cancer
101641553 (RXRB)
05207 Chemical carcinogenesis - receptor activation
101641553 (RXRB)
09162 Cancer: specific types
05226 Gastric cancer
101641553 (RXRB)
05216 Thyroid cancer
101641553 (RXRB)
05222 Small cell lung cancer
101641553 (RXRB)
05223 Non-small cell lung cancer
101641553 (RXRB)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
101641553 (RXRB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
etf03000
]
101641553 (RXRB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
etf03310
]
101641553 (RXRB)
Transcription factors [BR:
etf03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
101641553 (RXRB)
Nuclear receptors [BR:
etf03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
101641553 (RXRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
101641553
NCBI-ProteinID:
XP_004711796
LinkDB
All DBs
Position
Unknown
AA seq
395 aa
AA seq
DB search
MSVSFPMSLPVTSLFPSSQINSTVSLPGGGSGPQEDVKPPVLGVRGLHCPPPPGGPGAGK
RLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCRY
QKCLATGMKREAVQEERQRGKDKDGDGEGAGGAPEEMPVDRILEAELAVEQKSDQGMEGP
GGTGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSSLPLDDQVILLRAGWNELLIA
SFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRSLSRVLTELVSKMRDMRMDKTEL
GCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYPEQQGRFAKLLLRLPALRS
IGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLA
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtctccttcccaatgagtctccctgtgacttccctatttccctcatcccagatt
aactcaacagtatcgcttcctgggggtgggtctggcccccaagaagatgtgaagccacca
gtcttaggtgtccggggcctgcactgtccaccccctccaggtggccctggggctggcaaa
cgcctgtgtgcaatctgcggggacagaagctcaggcaaacactatggggtgtacagctgt
gagggctgcaagggcttctttaagcgcaccatccgcaaggacctcacctactcttgccgg
gacaacaaggactgcacggtggacaagcgccagcggaaccgctgccagtactgccgctat
cagaagtgcctggccacaggcatgaagagggaagcggtacaggaggaacgtcagcgggga
aaggacaaagacggggatggggagggggctgggggagcccccgaggagatgcctgtggac
aggatcctggaggcagagcttgctgtggagcagaagagtgaccagggcatggagggtcct
gggggaaccgggggtagcggcagcagccctaatgaccctgtgactaacatctgccaggca
gctgacaaacagctgttcacgctggtcgagtgggcgaagaggatcccacacttctcctca
ttgcctttggatgaccaggtcattttgctccgggcagggtggaacgagctgctcatcgcc
tccttctcccaccgctccatcgatgtccgagacggcatcctgctcgccacgggcctccac
gtgcaccgcaactctgcccactctgcaggcgtgggagccatctttgatcggtccctctcc
agggtgctgacagagctagtgtccaaaatgcgtgacatgaggatggacaagacagagctt
ggctgcctgagggcaatcattctcttcaatccagacgccaagggcctctccaaccccagt
gaggtggaggtcctccgggagaaggtgtatgcctccctggagacctactgtaaacagaag
taccctgagcagcagggacggtttgccaagctgctgctgcgcctccctgccctccggtcc
attggcctcaagtgtctggagcacctgtttttcttcaagctcattggcgacactcccatt
gacaccttccttatggagatgctcgaagctccccaccagctggcctga
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