Echinops telfairi (small Madagascar hedgehog): 101641592
Help
Entry
101641592 CDS
T08707
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf01524
Platinum drug resistance
etf03430
Mismatch repair
etf05200
Pathways in cancer
etf05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
101641592 (MSH6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101641592 (MSH6)
09162 Cancer: specific types
05210 Colorectal cancer
101641592 (MSH6)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
101641592 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
etf03400
]
101641592 (MSH6)
DNA repair and recombination proteins [BR:
etf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
101641592 (MSH6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
WPP
Motif
Other DBs
NCBI-GeneID:
101641592
NCBI-ProteinID:
XP_004699805
UniProt:
A0ABM0IGV9
LinkDB
All DBs
Position
Unknown
AA seq
1352 aa
AA seq
DB search
MSRQSTLYSFFPKSPPLNKASQAPARPSSDGDTAASPRASPTRSGGAARSEAGPGPVAGS
APPREEKKLNGGLRTPEVPASAYDFTPGDLVWAKMEGYPWWPCLVYNHPFDGTCIREKGK
SVRVHVQFFDDSPTRGWVSKRLVKPYTGSKAKEAQKGGHFYSAKPEILRAMQRADEALSK
DKVKRLELAVCDEPSEPEEEMEVDVTNAVDKHEEDNAVESEEEVQPKIEGPRRSSRQVKK
LRVISDSESDIGGSDVEFKPDAKEEGSSDEASSGMGDSESEGLYRPARVTAKRKRMVAGN
GSLKKKNSKKEVPHTTQKATGISPETKSNLGAFAAPQSSESQAHTSGGDDSGRPTVWYHE
TLEWLKEEKRRDERRRRPDHPEFDAATLYVPEDFLNSCTPGMRKWWQIKSQNFDLVIFYK
VGKFYELYHMDALIGVNELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKVARVEQTET
PEMMEARCRKMAHVSKHHRVVRREICRIITKGTQTYSVLEGDPSGNYSKYLLSLKEKEED
SSGHTRAYGVCFVDTSLGKFYIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGNLSTETKMI
LKSSLSSSLQEGLVSGSQFWDAAKTLRTLLEEGYFTEKLNEDSGVMLPQVLKDMTSESDS
IGLTPAEKSELAISALGGCVFYLQKCLIDQELLSMANFEEYIPLDSDIISATRPGAVFAR
ANQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERIDTCHTPFGKRLLKQWLCAPLCSPFPI
NDRLDAIEDLMAVPDKISEVVDLLKKLPDLERLLSKIHNVGSPLKLQNHPDSRAIMYEET
TYSKKKIIDFLSALEGFKVMCKIIEIMEEVVDGFKSQLLKQVITLQTKNPEGRFPDLTTE
LNRWDTAFDHERARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEKQRSRIGCRTIV
YWGIGRNRYQLEIPESFTNRNLPEEYELKSTKKGCKRYWTKTIEKKLANLMNAEERRDVS
LKDCMRRLFYNFDKNYKDWQSAVECVAVLDVLLCLANYSRGGDGPMCRPVILLPEGDTHP
FLELKGSRHPCITKTFFGDDFIPNNILIGCEEEEEKDSAFCVLVTGPNMGGKSTLMRQAG
LLAIMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILSHATAHS
LVLVDELGRGTATFDGTAIANAVVKELAENIKCRTLFSTHYHSLVEDYSQNAAVRLGHMA
CMVENECEDPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFEKITK
SLRLFREVCLVSEKSIVDAEAVHKLLTSIQEL
NT seq
4059 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacagagcaccttgtatagcttctttcccaagtctcccccgctgaataaagcc
agccaggccccagccaggccctctagcgacggcgacactgccgccagcccccgggcctcg
cctacccgcagtgggggtgcggcccggagcgaggccgggcctgggccggtggcgggctcc
gcgccgccacgcgaggagaagaaactcaacggagggctgcggacgccggaggtccccgcc
agtgcttatgatttcacgccaggtgatctggtttgggccaagatggaaggttacccctgg
tggccttgcttggtttacaaccacccttttgatgggacgtgcatccgggagaaagggaag
tcagtccgagttcatgtacagttttttgatgacagtccaacaaggggctgggtcagcaaa
aggctagtaaagccatatacaggatcaaaagcaaaggaagcccagaagggagggcatttt
tacagtgcaaagcctgaaatacttagagccatgcaacgtgcagatgaagccttaagtaaa
gacaaggttaagaggcttgaattggcagtatgtgatgagccctcggagccagaagaagag
atggaggtcgatgtaaccaatgcggtagataagcatgaagaagataatgcagtggagagt
gaagaggaagtgcagcctaagatagaaggacctaggcgaagtagccgccaagttaaaaaa
ctcagagtcatatcagactctgagagtgacattggtggttctgatgtggaattcaagcca
gatgccaaggaggaaggaagcagcgacgaagcaagcagtgggatgggggacagtgagagc
gaaggcctgtacaggcctgccagggtcactgcaaagcggaagagaatggtggctggaaac
ggctctctgaagaagaaaaactcaaagaaggaagtgccccataccactcaaaaagcaact
ggcatttcaccagaaaccaagagtaatttgggtgcttttgctgctcctcaaagttctgaa
tcccaagcccacactagcggaggggatgacagtggccgccccactgtctggtatcacgaa
acgttagaatggcttaaggaggagaagagaagagatgaacggaggagacggcctgatcac
cctgaatttgatgcggccacactctatgtgcctgaggatttccttaattcctgtactcct
gggatgaggaagtggtggcagattaagtctcagaattttgatctggtcatcttttataag
gtgggaaaattttatgagttataccacatggatgccctcattggagttaatgaactgggc
ctggtattcatgaaaggcaactgggcccattctggttttcctgaaattgcatttggccga
tattcagattccttagtgcagaagggttataaagtggcgcgagtggaacaaactgagacc
ccagaaatgatggaggcacggtgccggaagatggcacatgtatctaagcaccatagagtg
gtgaggagggagatctgtaggatcatcaccaagggcacacagacctacagtgtgctggaa
ggtgatccctcagggaactacagcaaataccttcttagcctcaaagaaaaagaggaagat
tcttcgggccacactcgcgcatacggtgtatgctttgttgatacttcattgggaaagttt
tacataggtcagttttctgatgatcgccattgttctaggttcaggactctagtggcacac
tatcctccagtacaagtcttgtttgaaaaagggaacctctcaacagaaaccaagatgatc
cttaagagttcattatcctcttctcttcaggaagggctggtatcaggctcccagttttgg
gacgcagccaaaactttgagaactctcctagaagaagggtattttacagaaaagctaaat
gaggacagtggggtgatgttgccgcaggtgcttaaagatatgacctcagaatctgattcc
attggcttgacaccagcagagaagagtgagttggccatctctgctctgggtggttgtgtt
ttctacctccaaaaatgtcttatagaccaggagcttttgtcaatggctaattttgaagaa
tatattcccttggattctgacataattagtgccacaagacctggtgctgtctttgctaga
gccaatcaacgaatggtgctagatgcagtgacattaaacaatttagagattttcttgaat
gggacaaatggttctactgaagggactctgctagagaggattgacacgtgccatactcct
tttggtaagcggcttctaaagcagtggctttgtgccccactctgtagccctttccctatc
aacgatcgattggatgccatagaagacctcatggctgtacctgacaaaatctctgaggtg
gtagatcttcttaaaaagcttcccgacctcgagaggctgctgagcaaaatacataatgtt
ggctctcccttgaagctccagaaccacccagatagcagggctataatgtatgaagaaaca
acatatagcaaaaagaagattattgattttctttctgctctagaaggattcaaagtaatg
tgtaaaattatagagataatggaagaagttgttgatggctttaagtctcaactcctcaag
caggtcatcactctccagacaaaaaatcctgaaggccgttttcctgacttgactacagaa
cttaaccgatgggatacagcctttgaccatgaaagagcccggaagactgggcttattact
cctaaagcaggatttgactcagattatgaccaggctcttgcggacataagagaaaatgag
cagagcctcctggagtacttggagaaacagcgcagtcggattggctgtaggaccatagtc
tactggggaattggtaggaaccggtatcagctggaaatcccagagagtttcaccaaccgt
aatttaccagaagaatatgagttgaaatctactaagaaaggctgtaaacgatactggacc
aaaactatcgagaaaaagttggctaatctgatgaatgcagaggaacgaagagatgtgtca
ctgaaggactgcatgcggcggttattctataactttgataaaaattacaaggactggcag
tcggctgtagagtgtgttgcagtgctggatgttttgctttgtttggctaactacagtcga
gggggtgatggccctatgtgtcgtcctgtgattctcttgccagaaggtgacacacatccc
ttcttagagcttaaaggatcacggcatccctgcattaccaagaccttttttggagatgac
tttattcctaataacatattaataggctgtgaggaagaggaggaaaaggacagcgctttt
tgtgtgcttgttactggaccgaatatggggggcaaatctacactcatgagacaggctggc
ctgttagctatcatggcccagatgggttgctatgtgcctgctgaagtgtgtaggcttaca
ccgattgatagagtatttactagacttggagcctcagatagaatcatgtcaggtgaaagt
acattttttgttgagttgagtgaaactgccagtatactttcacatgcaacagcacattct
ctggtgcttgtggatgaattagggcgaggtactgcaacatttgatgggacagcaatagca
aatgcagttgttaaggaacttgctgagaatataaagtgccgaacattgttttctactcac
taccattcattagtagaagattattctcaaaatgctgctgtgcgcttaggacacatggca
tgcatggtggaaaatgaatgtgaagatcccagccaggagactataaccttcctctataaa
ttcattaagggcgcttgtcctaaaagctatggcttcaatgcagcaaggcttgctaacctt
ccagaagaggttattcaaaagggacacagaaaagcaagagaatttgagaagatcacaaag
tcactgcgattatttcgagaagtttgcctggtgagtgaaaagtcaattgtagatgctgaa
gctgtccacaagttgctgacctcgattcaggaattatag
DBGET
integrated database retrieval system
