Echinops telfairi (small Madagascar hedgehog): 101641630
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Entry
101641630 CDS
T08707
Symbol
UTP18
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
101641630 (UTP18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
etf03009
]
101641630 (UTP18)
Ribosome biogenesis [BR:
etf03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
101641630 (UTP18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_TEP1_C
NBCH_WD40
Cytochrom_D1
Beta-prop_Vps41
PQQ_3
Beta-prop_DCAF4
Pox_D5
DUF5711
KNTC1_N
Hira
Motif
Other DBs
NCBI-GeneID:
101641630
NCBI-ProteinID:
XP_004707095
LinkDB
All DBs
Position
Unknown
AA seq
555 aa
AA seq
DB search
MPPERRSRKKPDRSTRAKPHRKGPMRADRRTGARPGGPAPKAAPSSQRKPPARPSAATSA
VAVAVEEERRLRQRHRVALEEDKPAAELCLEELVFGDVEDDEDALLRRLRGPRIQVPEDA
GDPEVQNEAKDHFPPQKKPVWVDEEDEDEEMVDMKNNRFRKDMMKNASESKLSKDQLQKR
LKEEFQHAMGGVPAWAETNRRKTSSDDESEEDEDDLLQRTGNFISTSTSLPKGILKMKNC
QNANAERPTTARISSVQFHPGAQVVMVAGLDNAVSLFQVDGKTNPKIQSIYLEKFPIFKA
CFSANGEEVLATSTHSKVLYVYDMLAGKLIPVHQVRGLKEKIVRSFEVSPDGSFLLINGV
AGYTHLLSMKTKELIGSMKINGRVAASTFASDSKKIYASSGDGEVYVWDVNSRKCLNRFA
DEGSLYGLSIATSRNGQYVACGSNCGVVNIYNQQSCLQETNPKPIKAVMNLVTGVSCVTF
NPTSEILAVASDKMREAVRLVHLPSCTVFSNFPVVRKKNISFVHTMDFSPRSGYFALGNE
KGKALLYRLHHYSDF
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgccgccggagcggagaagccggaagaaaccggaccggagcaccagagcgaagccacac
cggaagggtccaatgagggcagaccggaggaccggagcgaggccgggcggaccggcccca
aaggctgccccttcatcgcagcggaaaccgcctgcccggccgagcgcggcgacctctgca
gtcgcggtcgcggtggaggaggagaggcgacttcggcagcggcaccgggtggcgctggag
gaggacaagccggcggcggaactgtgcctggaggagctggtcttcggcgacgtcgaagac
gacgaggacgcgctgctgcggcggcttcggggcccgcggattcaagtaccggaggatgct
ggtgacccggaagtgcagaatgaagcaaaagatcatttccctcctcaaaagaagccagtt
tgggtggatgaagaagatgaagatgaggaaatggttgacatgaagaacaataggtttcgg
aaagatatgatgaaaaatgccagtgaaagtaaactttcaaaagaccagcttcagaagaga
ctgaaagaagaatttcagcatgccatggggggagtacctgcctgggccgagactaatagg
cggaaaacatcttcagatgatgaaagtgaagaggatgaagatgacttgttgcaaaggact
gggaatttcatatcaacatcaacttctcttccaaaaggaattttgaagatgaagaactgc
caaaatgctaatgctgaacgtcccacaactgctcggatctcatccgtgcaatttcatcct
ggtgctcaagtggtgatggttgctgggttagacaatgctgtgtcgttgttccaggttgat
ggaaaaacgaatcctaaaatccagagcatctatttggaaaagtttccaatctttaaggct
tgttttagtgctaatggagaagaggttctagccacgagtacccacagcaaagtcctttat
gtctatgatatgctggctggaaagttaattcctgtgcatcaagtgagaggtttgaaagag
aagatagtgaggagcttcgaagtctccccagatgggtccttcttgctcataaatggcgtt
gctggatatactcacttgttgtcaatgaagactaaagaactgattggcagcatgaaaatt
aatggaagggttgccgcatccacattcgcttcggacagcaagaaaatatatgcctcctca
ggggatggggaagtttacgtttgggatgtgaactctaggaagtgccttaacagatttgct
gatgaaggcagtttatatggattaagcattgccacgtcgaggaatggacagtacgtggct
tgtggttctaattgtggagtggtaaacatatacaatcagcaatcttgtctccaagaaaca
aacccaaagccgatcaaagctgtaatgaacttggtcacaggtgtctcctgtgtgaccttc
aaccctacttcagaaatcttggcagttgcttcggacaaaatgagagaagcagtcagactg
gttcaccttccttcttgtacagtgttttccaactttccagttgttagaaagaagaatatt
tcgtttgttcataccatggacttttctcctagaagtggatattttgccttgggcaacgag
aagggcaaagccctgctgtataggttgcaccattactcagacttctga
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