Echinops telfairi (small Madagascar hedgehog): 101642076
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Entry
101642076 CDS
T08707
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf03082
ATP-dependent chromatin remodeling
etf04714
Thermogenesis
etf05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101642076 (SMARCD1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
101642076 (SMARCD1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
101642076 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
etf03021
]
101642076 (SMARCD1)
03036 Chromosome and associated proteins [BR:
etf03036
]
101642076 (SMARCD1)
Transcription machinery [BR:
etf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101642076 (SMARCD1)
Chromosome and associated proteins [BR:
etf03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101642076 (SMARCD1)
PBAF complex
101642076 (SMARCD1)
GBAF(ncBAF) complex
101642076 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
DivIC
Motif
Other DBs
NCBI-GeneID:
101642076
NCBI-ProteinID:
XP_004711451
LinkDB
All DBs
Position
Unknown
AA seq
476 aa
AA seq
DB search
MGPAPGQGLYRSPMPGAAYPRPGMLPGSRMTPQGPSMGPPGYGGNPSVRPGLAQSGLDQS
RKRPAPQQIQQVQQQAVQNRNHNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQ
TIMRKRLDIQEALKRPIKQKRKLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDS
ALSKYDATKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVN
VRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVIC
DKYLQQIFESQRMKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDT
LKTQMNSFLLSTASQQEIATLDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQ
CRDLKTMTDVVGNPEEERRAEFYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgggcccggcgccgggtcaagggctgtaccgctctccgatgcccggcgcggcctatccg
agaccaggtatgctgccaggcagtcgaatgacacctcagggaccttccatgggcccccca
ggctatggggggaacccttccgtccgacctggcctggcccagtcagggctggaccaatcc
cgcaagagacctgcacctcagcagatccagcaggtccagcagcaggcagtccagaatcga
aaccacaatgcaaagaaaaagaagatggctgacaaaattctacctcaaaggattcgggaa
ctggtaccagagtctcaggcctatatggatctcctggcttttgaaaggaagctggaccag
actatcatgaggaaacggctggatatccaggaggccttgaaacggcccatcaagcaaaag
cggaagctgcgaattttcatttctaacactttcaatccggctaagtcagatgccgaggat
ggggaagggacggtggcttcctgggagcttcgggtagaaggacggctcctggaggattcc
gccttgtccaaatatgatgctaccaaacaaaaaaggaagttctcgtccttttttaagtcc
ttggtgattgagctggacaaagacctgtatgggccagacaaccatctggtagaatggcac
aggaccgccaccacccaggagactgacggcttccaggtgaagcggccgggagacgtgaat
gtgcgctgtactgtcctgctgatgctggattaccagcctccccagtttaaattagatcct
cgcctggctcggctcttgggcatccacacgcagactcgcccggtgattatccaggccctg
tggcagtatattaagacacacaagctccaggaccctcacgagcgggagtttgtcatctgt
gacaagtacctccagcagatcttcgagtctcagcgtatgaagttctcagagatcccccag
cggctccatgctttgctgatgcccccagaacccatcatcattaatcacgtcatcagtgtt
gaccctaatgatcagaaaaagacagcttgttacgacattgatgtggaagtggatgataca
ttgaaaacgcaaatgaattccttcctgctgtccactgccagccagcaagagatcgccact
ctagacaacaagatccacgagaccatagaaaccatcaatcagctgaagacacagcgggag
ttcatgctaagctttgcccgagaccctcagggcttcattaacgactggctccagtcccag
tgccgggacctcaagaccatgactgacgtggtgggtaatccagaggaggagcgccgagct
gagttctacttccagccttgggctcaggaggccgtgtgccgctacttctactccaaggtg
caacagagacgacaggaactagagcaagccctggggatccgaaacacctag
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