Echinops telfairi (small Madagascar hedgehog): 101642568
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Entry
101642568 CDS
T08707
Symbol
DDX52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
etf03009
]
101642568 (DDX52)
Enzymes [BR:
etf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101642568 (DDX52)
Ribosome biogenesis [BR:
etf03009
]
Eukaryotic type
90S particles
Helicases
101642568 (DDX52)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
ResIII
P-loop_SecA
AAA_19
Cas3-like_C_2
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
101642568
NCBI-ProteinID:
XP_004707419
UniProt:
A0ABM0ITN9
LinkDB
All DBs
Position
Unknown
AA seq
595 aa
AA seq
DB search
MDVHDLFRRLGAGAKFDVSRFSADAARFQLGKRKYDFNSSEMLQGLDFFGNKKSVPGECG
VSGTHQGLQDEEKTEESLKRRREKKKRKMMTSEITSPEEGTTIQWMSSVEAKFEDKKVKE
EKKLTSGKLEHLRKEKINIFRNKHKIHVQGTDLPDPIATFQQLDQEYKISSRLLQNILDA
GFQVPTAIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALIISPT
RELASQIHRELLKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFGKGPVLVQGIWKLQYSQ
GVLLFLSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQWC
KLNLDNVITVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQSIER
AKELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVNLV
INYDFPTSSVEYIHRIGRTGRAGHKGKAVTFFTEDDKPLLRSVANVIQQAGCPVPEYIMS
FKKLLSKQKKKMVKKPLERESISTTPKYFLEKAKSKRKKASGQNSKKKVALEDKI
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggacgtccacgatcttttccgccggctgggcgccggggccaagttcgacgtgagtcgc
ttctcggcggacgcggcgcgttttcagcttggaaaaaggaaatatgactttaattcttca
gagatgctgcaggggctggacttttttggaaacaagaagtctgtcccaggcgagtgtgga
gtatctggaacacaccaagggctccaagatgaagagaaaacggaagaaagccttaaaagg
aggagggaaaagaaaaagagaaagatgatgacttcagaaattacttctccagaagaagga
actacaatacagtggatgtcatcagtggaagccaagtttgaagataaaaaagttaaagaa
gaaaaaaagctaacttcgggaaagttggaacatctcagaaaggaaaagataaatatcttc
cggaataaacacaaaatccatgtccaaggaactgatcttcctgacccaattgctaccttt
cagcagcttgaccaagaatataaaatcagttctcgattgcttcagaatattctagatgca
ggtttccaggtgcccacggcgatccaaatgcaggccattccggtgatgctgcatggtcgg
gaacttctggcctctgcacctactggatcgggaaaaactttggcttttagcattcccatt
ttgatgcagctgaaacaacccacaaataaaggcttccgggctctgattatttcaccaaca
agagaacttgccagccagattcaccgagaattattaaaaatctctgagggaacgggattc
aggatacacatgattcacaaagcagcagtggccgccaaaaaatttggacctaaatcatct
aagaagtttggtaagggacctgttcttgtacaagggatttggaaattgcaatattcacaa
ggtgttttgttatttcttagtgttgagtggctcgtagtggacgaatcagacaaactgttt
gaagatggcaaaactgggttcagagaccagctggcttccattttcctggcctgcacatcc
cacaaggtcagaagagctatgttcagtgcaacttttgcatatgatgttgaacaatggtgc
aaactcaatctggacaatgtcattactgtatccatcggagcaaggaattctgcagtagag
actgtagaacaagaactcctgtttgttgggtctgagactggaaaacttctggccatgagg
gaacttgttaaaaagggtttcaatccacctgttcttgtttttgttcagtccattgaaagg
gctaaagaacttttccacgagctcatatatgaaggtattaatgtggatgttattcatgca
gagaggacgcagcaacagagagataacaccgtccacagcttcagagcaggaaaaatctgg
gttcttatttgtacagccctattggcaagagggattgattttaaaggtgtgaacttggtg
atcaattacgactttccaaccagctcagtggaatatatccacaggataggtcgaactgga
agagcaggacataaaggaaaagctgttacttttttcactgaagatgataaaccattatta
agaagtgttgccaatgttatacaacaagctggatgtcctgtgccggagtacataatgagt
tttaaaaaactactaagcaaacaaaagaaaaagatggtcaagaaaccactggagagggag
agcattagtacaactccaaaatatttcttagaaaaagccaagagtaaacggaaaaaagcc
tctggtcaaaacagcaagaagaaagtagctcttgaagacaaaatttaa
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