Echinops telfairi (small Madagascar hedgehog): 101642940
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Entry
101642940 CDS
T08707
Symbol
PRPF38A
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101642940 (PRPF38A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
etf03041
]
101642940 (PRPF38A)
Spliceosome [BR:
etf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
101642940 (PRPF38A)
Complex C
U4/U6.U5 tri-SnRNP related factors
101642940 (PRPF38A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
101642940
NCBI-ProteinID:
XP_004699480
LinkDB
All DBs
Position
Unknown
AA seq
312 aa
AA seq
DB search
MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELRFVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHSERVCDIILPRLQKRYVLEEAEQLEPR
VSALEEDMDDVESSEEEEEEDEKLERVPSPDHRRRSYRDLDKPRRSPTLRYRRSRSRSPR
RRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHHSHRHRSHSKSPERS
KKSHKKSRRGNE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccgtacggtgaaggatgcccacagcatccacggcaccaacccgcagtatctg
gtggagaagatcattcggacgcgcatctacgagtccaagtactggaaggaggaatgcttt
gggcttacagctgaacttgtagtcgataaagccatggagttaaggtttgtgggtggtgtt
tatggcggcaacataaagccaactccctttctgtgtttgaccttgaagatgctacagatt
caacctgagaaggatatcattgtagagtttatcaaaaacgaagacttcaagtatgtccgc
atgttgggggccctttacatgagactgacaggcacagcaattgactgttacaagtacttg
gagcctctctacaatgactatcggaaaatcaagagccaaaaccgaaatggggaatttgaa
ctgatgcatgtggacgagtttattgatgagctactacatagtgagagagtctgtgacatt
attctgccccgactacagaagcgctatgtgctggaagaagctgaacaattggagcctcgg
gttagtgccctagaagaggacatggatgacgtggagtccagtgaagaggaggaggaagaa
gatgagaagctggagagagtgccctcacctgatcaccgcaggagaagctacagagacttg
gacaagccccgtcgctctcccacgctgcgctacaggaggagtaggagtcggtctcccaga
aggcggagtcggtctcccaagaggaggagcccttccccacgccgagaaagacataggagc
aagagtccaagacggcaccgcagtaggtcccgagatcgacggcacagatcccgctccaag
tccccaggtcaccaccacagtcatagacacaggagccactcaaagtcccctgaaaggtct
aagaaaagccacaagaagagccggagagggaatgaataa
DBGET
integrated database retrieval system
