Echinops telfairi (small Madagascar hedgehog): 101642988
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Entry
101642988 CDS
T08707
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf03030
DNA replication
etf03420
Nucleotide excision repair
etf03430
Mismatch repair
etf03440
Homologous recombination
etf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101642988 (RPA1)
03420 Nucleotide excision repair
101642988 (RPA1)
03430 Mismatch repair
101642988 (RPA1)
03440 Homologous recombination
101642988 (RPA1)
03460 Fanconi anemia pathway
101642988 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
etf03000
]
101642988 (RPA1)
03032 DNA replication proteins [BR:
etf03032
]
101642988 (RPA1)
03400 DNA repair and recombination proteins [BR:
etf03400
]
101642988 (RPA1)
Transcription factors [BR:
etf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
101642988 (RPA1)
DNA replication proteins [BR:
etf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
101642988 (RPA1)
DNA repair and recombination proteins [BR:
etf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
101642988 (RPA1)
MMR (mismatch excision repair)
101642988 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
101642988 (RPA1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
DUF8448
Motif
Other DBs
NCBI-GeneID:
101642988
NCBI-ProteinID:
XP_012861191
UniProt:
A0ABM0ZRF8
LinkDB
All DBs
Position
Unknown
AA seq
666 aa
AA seq
DB search
MANQLSEGAIVAIMQQGDTSIKPVLQVINIRPIVTGNSPPRYRLLMSDGVNTLSSFMLAT
QLNPLVEEEQLSSNCICQINRFIVNTLRDGRKVVILMELDVLKLAEAVGIKIGNPVPYNE
GHGQQQQQVVPAPVSATSPPTSKPQQQNGSSGMGSTAPKAYGASKTFGKPGGGSSLGSTP
GGTQAKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIEMVDESGEIRATA
FNEQVDKFFPLIEVNKVYYFAKGTLKIANKQFTAIKNDYEMTFNNETSVLPCEDDHHLPT
VQFDFTGIGDLESKPKDSLVDIIGVCKSYEDAMKITVRSNNREISKRNIYLMDMSGKVVS
ATLWGEDADRFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTVIVNPDIPEAYKLRGWFDS
EGQALDGVSISDLKSGGVGGSNTNWKTLYEVKSENLGQGDKADYFSTVATVVYLRKESCM
YQACPTQDCNKKVIDQQNGLYRCEKCDSEFPNFKYRLILSANIADFLENQWVTCFQETAE
AILGQSSAYLGELKEKNEQAFEEAFQNANFRSFTFRIRVKLETYNVSAVGGGHAGCCRGC
VGGSCWLSPCQHRDSRCFPVPGPVLSSVKPSITEVQGDERFHPVFGAGRLHGLLSSDLFY
FNLSLF
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggccaaccaactgagcgaaggggccattgtggccatcatgcagcagggagatacatcc
ataaaacctgtcctccaagtcattaacatccgtcccattgtcacggggaacagtcccccc
cgctaccggctgctgatgagcgacggcgtgaataccctgtcctcgttcatgttggccaca
cagttgaaccctctagtggaagaagaacagttgtccagcaactgtatttgccagattaac
cggtttattgtgaacacgctcagagatggaaggaaagttgttatcttgatggagttggac
gttttgaagttggctgaagcagtagggataaagattggcaatccggtaccttacaatgaa
ggtcatgggcagcagcagcagcaagtagtccctgctcctgtctcagcaaccagtccacca
accagcaaaccccagcaacagaatgggagttcaggaatgggttccactgcacctaaggct
tacggtgcctccaagacctttggaaaacctggtgggggttccagtctggggagcactcct
gggggcacacaggccaaggtggtgcccattgccagccttactccttaccagtccaagtgg
actatttgcgctcgtgttaccaacaagagtcagatccgaacctggagcaattctcgaggg
gaaggaaagctcttctctatagaaatggttgatgaaagcggtgaaatccgagccaccgct
ttcaatgagcaagtggacaagttcttccccttgattgaagtgaacaaggtctattatttc
gcgaaaggcaccctgaagatcgctaataaacaattcacagctattaaaaacgactatgag
atgaccttcaacaatgagacgtctgtcctgccctgtgaagatgaccatcacttacccaca
gttcagtttgatttcacagggattggggacctagagagcaagcccaaagactcacttgta
gacatcattggggtctgcaagagctacgaagacgctatgaaaatcacagtgaggtccaac
aacagagagatctcgaagagaaatatctacttgatggacatgtccgggaaggtggtgtct
gctactctgtggggagaagatgcagatagatttgatggttctcgacagcccgtgatggct
atcaaaggagccagagtgtctgattttggtggacggagcctctcggtgctgtcttcaagc
actgtcattgtgaatcccgatatcccagaggcctataagcttcgtggatggtttgactca
gaaggacaagccttagatggtgtctccatctctgatctaaagagtggaggcgtcggcggg
agcaacaccaactggaaaaccctctatgaagtcaagtcggagaacctgggccagggcgac
aaggcggactacttcagcaccgtggccaccgtggtgtatcttcgcaaggagagctgcatg
taccaggcctgcccgactcaggactgcaacaagaaggtgattgaccagcagaacggcctg
taccgctgtgagaagtgtgacagcgagtttcccaactttaagtaccgcctgatcctgtcg
gcaaatattgcagatttcctagagaaccagtgggtgacgtgtttccaggagactgcggag
gccatccttggacaaagctctgcgtaccttggggagttgaaagagaagaatgaacaggcg
tttgaggaagcgttccagaatgccaacttccggtcgttcacattcaggatcagggtcaaa
ctggagacctacaacgtgagtgcggtcggtggcggtcacgctgggtgctgcagagggtgt
gtggggggcagttgctggttgtcaccctgccagcaccgtgacagtcggtgctttcctgtg
cccggcccagtcctgagctcagtgaagccctccatcactgaggtacagggagacgagcgg
tttcaccctgtgtttggggctggaaggctgcacggcctccttagctcagatctcttttat
tttaatttgtctttgttctga
DBGET
integrated database retrieval system
