Echinops telfairi (small Madagascar hedgehog): 101643199
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Entry
101643199 CDS
T08707
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf04136
Autophagy - other
etf04140
Autophagy - animal
etf04211
Longevity regulating pathway
etf05010
Alzheimer disease
etf05014
Amyotrophic lateral sclerosis
etf05016
Huntington disease
etf05017
Spinocerebellar ataxia
etf05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101643199 (ATG13)
04136 Autophagy - other
101643199 (ATG13)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
101643199 (ATG13)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
101643199 (ATG13)
05014 Amyotrophic lateral sclerosis
101643199 (ATG13)
05016 Huntington disease
101643199 (ATG13)
05017 Spinocerebellar ataxia
101643199 (ATG13)
05022 Pathways of neurodegeneration - multiple diseases
101643199 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
etf04131
]
101643199 (ATG13)
03029 Mitochondrial biogenesis [BR:
etf03029
]
101643199 (ATG13)
Membrane trafficking [BR:
etf04131
]
Autophagy
Autophagosome formation proteins
ULK complex
101643199 (ATG13)
Atg1 complex
101643199 (ATG13)
Mitochondrial biogenesis [BR:
etf03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
101643199 (ATG13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
101643199
NCBI-ProteinID:
XP_004708395
UniProt:
A0ABM0IV02
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
METDLNSQDRKDLDKFIKFFALKTVQVIVQSRLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYTVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLNGLGEGFQTVRVGTVGTPV
GTVTLSCAYRINLAFMSTRQFERTPPIMGIIIDHFVDRPYSSASPMHPCNYRTAGEDGSG
THPSVEDSQEVCTTSFSTSPPTQCVFTVTKAHFQTPTPVVTDTLRVPMAGLAFPHQLSSS
RLSYQPAALGVGSADLAYPVVFAAGLNATHPHQPTVPGKEGGGLPFAPSNQPAHGAQADQ
ERLATCMPSDGAHCVATPSSSEDTETVSNSSEGRPSPHDVMETIFVRKVGAFVNKPINQV
TLTNLDIPFAMFAPKHLELEDADPMVHPPTSPETGSPLQGSLHSEGSSGGSSGNTHDDFV
MIDFKPAFSKDDILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAVHERN
VREFDAFVETLQ
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgatctcaattcccaggacaggaaggacctggacaagttcattaagtttttt
gccctcaagactgtccaagtgattgtccagtctcgacttggtgagaagatttgcactcgt
tcatcttcgtctccaacgggttcagattggttcaatttagccatcaaggacatcccagag
gttacacatgaagcaaagaaggcactggcagggcagctgcctgctgtggggaggtctatg
tgtgtggagatttcactcaagacttctgagggagattccatggaattggagatttggtgt
cttgaaatgaatgaaaagtgtgataaggagatcaaagtttcctacacggtatacaaccga
ctgtctttgctgctgaagtctctccttgctataacgagggtaacaccagcctatagactc
tccaggaaacaagggcatgaatatgtcatcctatacagaatatattttggggaagttcag
ctgaatggcttaggagaaggcttccaaacagttcgtgttggtacagtgggaacccctgtg
ggcaccgtcactctttcttgtgcttacagaattaacctggcattcatgtctaccaggcaa
tttgagagaactccacctatcatggggataatcattgatcactttgtggaccgtccctac
tcgagcgcctcgcccatgcacccctgcaattacaggaccgctggggaggacggcagcggg
acacacccctccgtggaagactctcaggaagtgtgcaccacctccttttccacctccccg
ccaacccagtgtgtgtttactgtcacaaaggcacattttcagacccctactcctgtggtg
acggacaccttgcgggtccccatggcaggcctggcctttccccaccaactctcaagctct
cgcctttcctatcagcctgctgccctgggcgttggatcagctgacctggcttatccagta
gtgtttgctgctggcctaaatgctacccaccctcaccagcccacggttcccgggaaggaa
ggtggtgggctgccctttgctccttccaaccagcccgcccacggtgcccaggctgaccag
gagagattggccacctgcatgccttctgacggggcccactgtgtggccacaccttccagc
agtgaggacacagaaacagtgtcaaacagcagcgaggggcgaccctccccccatgacgtc
atggagaccatctttgtccggaaagtgggagcgtttgtcaacaaaccaatcaaccaggtg
accctgaccaatttagacatcccctttgccatgtttgctcccaagcatttggagctggaa
gatgcggacccaatggtgcatccccccacgtcccccgagacggggtctcctctccaaggc
agcctgcactccgagggctccagcgggggcagcagcggtaacacccacgacgacttcgtg
atgatcgacttcaaaccagctttttcaaaagacgacattctcccgatggacctggggacc
ttctatcgtgaatttcagaacccccctcagctgagcagcctttccatagacattggggcg
cagtccatggccgaggatttggactcactaccagagaagttggcagtgcatgagaggaac
gtccgagagtttgatgccttcgtagaaaccctgcagtaa
DBGET
integrated database retrieval system
