Echinops telfairi (small Madagascar hedgehog): 101643511
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Entry
101643511 CDS
T08707
Symbol
FDFT1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
etf
Echinops telfairi (small Madagascar hedgehog)
Pathway
etf00100
Steroid biosynthesis
etf01100
Metabolic pathways
Module
etf_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
etf00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
101643511 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
etf01006
]
101643511 (FDFT1)
Enzymes [BR:
etf01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
101643511 (FDFT1)
Prenyltransferases [BR:
etf01006
]
Terpene biosynthesis
Squalene/phytoene synthase
101643511 (FDFT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
101643511
NCBI-ProteinID:
XP_004707701
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
MAAATCSTKAMVLFKRTLALSPAAAPRGAGPASPPRGSPFPPCAWPSKDRPWGEGACGRL
WSPTTVRRLSSHSSPSASAVAVCLLCPQDSLRSSLKTCYKYLNETSRSFALVIQGLDGEM
RHAICIFYLVLRALDTVEDDMSISMEKKVPLLHNFHTFLYDPDWRFMESKEKHRQVLEDF
PTISLEFRNLAEKYQTVIADICRKMGFGMAEFLEKHITSVQEWDKYCHYVAGLVGIGISQ
LLSASELEDPIVGKDTKLANSMGLFLQKTNIIRDFLEDLQEGRQFWPQEVCSRYVKKMSD
FTKPENFDLAVQCLNELITNALHHLPDVITYLSRLRNQSIFNFCAIPQVMGIATLAACYN
NKQVFKGVVKIRKGQAVALMMDATNISAVKAMIYQYIEEIYHQIPNSDPSSDQTKQIIST
LKTQGLSDCQVVSRSHFSPIYLSFFMLLAALSWQYLSMLSQVSEDYVQTGEH
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagctacctgcagcaccaaggccatggtccttttcaagcggactttagctctg
agccctgccgcggcgccccggggcgcgggcccggcgtctcccccgcggggcagtcccttc
ccgccctgcgcctggccctccaaggaccggccgtggggcgagggcgcctgtggccggctc
tggagcccgaccaccgtgaggcgtctgtcctcccattccagcccctcagcgtctgccgtc
gcggtgtgtctgctatgcccgcaggactcgctgaggagcagcttgaagacgtgttacaag
tatctgaatgagaccagtcggagtttcgctttggtaatccagggcctggacggggaaatg
cgccatgcaatatgcatattttatttggttctcagagctctggacaccgttgaagatgac
atgtctattagtatggaaaaaaaggtcccattgctacacaattttcacactttcctttat
gatccagactggcgcttcatggagagcaaggagaagcatcgacaagtgctcgaggatttt
ccaacgatctctcttgagtttagaaatctggctgagaaatatcaaacagtgattgctgac
atttgccggaagatgggatttgggatggcagagtttttggaaaagcacatcacctctgta
caggagtgggacaagtactgtcactacgttgctggcctggtgggaattggcatttcccag
ctgttgtcagcttcagagttagaagaccccatagttggtaaagatacaaaacttgccaac
tctatggggctgtttctgcagaaaacaaacatcattcgtgattttctggaagacctgcaa
gaaggaagacaattttggcctcaagaggtttgtagcaggtatgttaagaagatgagtgat
ttcactaaaccagagaactttgacttggctgtccagtgcctgaatgaacttataaccaat
gcgttacatcacttgccagatgtcatcacctacctttcaagacttagaaaccaaagcatc
tttaacttctgtgccatcccacaggtcatgggcattgctactttggctgcttgttataat
aataagcaggtattcaaaggggtcgtgaagattcgcaaagggcaagcagtagcactaatg
atggatgccactaatatatcagctgtcaaagctatgatataccagtacatagaggagatt
tatcatcagatccccaactcggacccatcttctgatcaaacaaagcagatcatctccact
ttgaagacgcagggcctctctgactgtcaggtggtctcccgaagccacttctctcctatt
tacctgtcgtttttcatgctcctggctgccctgagctggcagtatctgagcatgctatcc
caggtctccgaagactatgttcagactggagaacactga
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